Gene Sama_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3221 
Symbol 
ID4605468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3814208 
End bp3814882 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content58% 
IMG OID639782637 
Productfumarate reductase cytochrome B subunit 
Protein accessionYP_929093 
Protein GI119776353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCA AACTGGACAT AAGACGCTGG AGCGGCGTGC TGGATTTAGG GCAGAGCGTC 
AGCGGAGTGG TACTGGCACT CTTTCTGTGG ACCCACTTGT TGTTGGTGTC GTCCATTTTG
CTTGGCCCCG AGGCCATGAC CTGGGTAGCT CGCAATATGG AGCTGGCCTT TTTATCTGAT
GATGGTCATG GCTATCCCTG GGTGGTGAGC CTGATAGCCA TAGGTGTGGC GGCCCTGGCG
GCCTTCCATG TGCTGGTGGC CATTCATAAG CTGCCCCTGA GCCTGCGTCA GCAAAAGGCG
CTGAAAAGCC AGATGCAGGT GATCAATCAC AGCGATACTC GCCTGTGGAG CTGGCAGGCC
GGTACCGGCA TTGTGATCTT AATGCTGTTG CCCGTGCACC TGTGGCTGGT GGGCAGCGCG
CCCGAGACCA TAGGCCCTGT GGGCAGTGCC CAGCGGATTT GGGGTGAGTA TGGATATTTG
ATTTACCTGC CGCTGCTGCT GACAGTCGAG CTGCACGCTG CCATTGGTCT TTACCGGGTG
GCGCTGAAAT GGGGTGCGGC GCGGGATCTC AATACCCGGG CAAGATTAAG AACCATCAAG
ACGGTGCTCA GTGTGCTGTT TGTGGGTATA GGACTGGCGG CGTTGCTGGC CTTTATTCCC
CATACTCCCG TGTAA
 
Protein sequence
MAGKLDIRRW SGVLDLGQSV SGVVLALFLW THLLLVSSIL LGPEAMTWVA RNMELAFLSD 
DGHGYPWVVS LIAIGVAALA AFHVLVAIHK LPLSLRQQKA LKSQMQVINH SDTRLWSWQA
GTGIVILMLL PVHLWLVGSA PETIGPVGSA QRIWGEYGYL IYLPLLLTVE LHAAIGLYRV
ALKWGAARDL NTRARLRTIK TVLSVLFVGI GLAALLAFIP HTPV