Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3221 |
Symbol | |
ID | 4605468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3814208 |
End bp | 3814882 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639782637 |
Product | fumarate reductase cytochrome B subunit |
Protein accession | YP_929093 |
Protein GI | 119776353 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGGCA AACTGGACAT AAGACGCTGG AGCGGCGTGC TGGATTTAGG GCAGAGCGTC AGCGGAGTGG TACTGGCACT CTTTCTGTGG ACCCACTTGT TGTTGGTGTC GTCCATTTTG CTTGGCCCCG AGGCCATGAC CTGGGTAGCT CGCAATATGG AGCTGGCCTT TTTATCTGAT GATGGTCATG GCTATCCCTG GGTGGTGAGC CTGATAGCCA TAGGTGTGGC GGCCCTGGCG GCCTTCCATG TGCTGGTGGC CATTCATAAG CTGCCCCTGA GCCTGCGTCA GCAAAAGGCG CTGAAAAGCC AGATGCAGGT GATCAATCAC AGCGATACTC GCCTGTGGAG CTGGCAGGCC GGTACCGGCA TTGTGATCTT AATGCTGTTG CCCGTGCACC TGTGGCTGGT GGGCAGCGCG CCCGAGACCA TAGGCCCTGT GGGCAGTGCC CAGCGGATTT GGGGTGAGTA TGGATATTTG ATTTACCTGC CGCTGCTGCT GACAGTCGAG CTGCACGCTG CCATTGGTCT TTACCGGGTG GCGCTGAAAT GGGGTGCGGC GCGGGATCTC AATACCCGGG CAAGATTAAG AACCATCAAG ACGGTGCTCA GTGTGCTGTT TGTGGGTATA GGACTGGCGG CGTTGCTGGC CTTTATTCCC CATACTCCCG TGTAA
|
Protein sequence | MAGKLDIRRW SGVLDLGQSV SGVVLALFLW THLLLVSSIL LGPEAMTWVA RNMELAFLSD DGHGYPWVVS LIAIGVAALA AFHVLVAIHK LPLSLRQQKA LKSQMQVINH SDTRLWSWQA GTGIVILMLL PVHLWLVGSA PETIGPVGSA QRIWGEYGYL IYLPLLLTVE LHAAIGLYRV ALKWGAARDL NTRARLRTIK TVLSVLFVGI GLAALLAFIP HTPV
|
| |