| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3220 |
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| Symbol | |
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| ID | 4605467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3812088 |
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| End bp | 3814127 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782636 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | YP_929092 |
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| Protein GI | 119776352 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTCA TTTATACAGA CTGTCTTGTG GTGGGCGCGG GCCTTGCGGG TCTCAGGGTT
GCCATTGCCG CCAAAGAAAG GGGCCACGAT ACCTTGGTGT TATCCCTCAT TCCGGCCAAA
CGCAGCCATT CGGCGGCGGC ACAGGGCGGT ATGCAGGCGA GCCTGGGGAA TACGGTCAAG
GGCCTTGGCG ATAATGAAGA TGTGCACTTT CAGGACACGG TAAAGGGCTC AGACTGGGGC
TGCGACCAAA CCGTGGCGCG CATGTTTGCC CACTGTGCCC CCAAGGCGGT GCGGGAGCTG
GCCAACTGGG GCGTGCCCTG GACCCGGGTG ACCAAGGGCC CCCGTGAAGT GGTGGTAAAT
GCCGAGCGCA TCACCATCGA AGAAGCCGAA GCCGCCCATG GACTGATTAA CGCCCGCGAT
TTTGGTGGCA CCAAAAAATG GCGCACCTGC TACACAGCCG ACGGCACCGG CCACTCGCTC
TTGTATGCGG TGGATAACAA GGCCATTTCC CTTGGCATTC CAGTCCATGA GCGGGTAGAA
GCCCTGTCGA TTATTCACGA TGGCGAGCGC TGCCACGGTG TAGTGGCTCG CTGCCTTATC
ACAGGTGAAC TGCGCGCCTA TATCGGCAAG TCCACTACCA TAGCCACCGG TGGCTATGGC
CGTATTTATG AGGTGTCCAC CAACGCCATC ATCTGTGAGG GTGTAGGTCA GGCACTGGCG
CTGGAGACCG GCGTCGCCAC CCTTGGCAAC ATGGAAGCGG TGCAGTTTCA CCCCACCGCC
ATTGTGCCCG TGGGGATCCT CACTACCGAA GGTTGCCGCG GTGACGGTGG TTTGCTGCGT
GACAAAGACG GCTACCGCTT TATGCCGGAC TATGAGCCGG AGAAAAAAGA GCTCGCCTCC
CGCGACGTGG TGTCGCGCCG CATGACAGAG CATATGCGCA AGGGCAAGGG CGTCGACAGC
CCATACGGCC CGCACCTGTG GCTGGATATC ACCCTGCTGG GTCGCAAACA CATAGAAACC
AACCTGCGGG AAGTGAAAGA AATCTGCGAA AACTTCCTCG GCATTGACCC CGCCAAGGAT
TGGATCCCGG TGCGTCCGAC CCAGCACTAC TCCATGGGCG GTATCCGCAC CACGCCAACC
GGTGAGAGCC CGCAGCTCAA GGGCCTGTTT GCCGTGGGAG AGGCCGCCTG CTGGGATATG
CACGGTTTTA ACCGCCTCGG GGGTAACTCG CTCGCTGAAA CCGTGGTGGG CGGCATGATC
ATCGGCAAAT ACGTAGCGGA CTTTTGTGAC GATAACGATT TGGTGCTGGA TACCGGCCTG
GCCAAACGTT ATGTGGACAA GGTGCGCACC GAAATCGATG AGTTGATTGA AGGCAAGGGT
ACTGAGAACC CCTGGGAGCT CAAGTCTGCG ATGCAGCGGG TGATGATGGA CTATGTGGGC
ATTTTCCGTA ATGGCCCCGA ACTCAATGAA GCAGTAAAAC AGCTTAAGGC GTTGCTGGCA
CGCTCAGTTA ATCTGGGTGT GAGCTGTAAA AAACGCCATG CCAACCCCGA ACTGGTAGAA
GCGCTGCGGG TACGCCGCAT GCTGAAAGTA GCGCTCACCG TGGCCTGCGG CGCCGCGGCC
CGCACCGAGA GCCGTGGTGC CCACGCCCGG GAAGACTTCC CACAGCGCAA CGACAAAGAC
TGGCTGTGCC GCACCCTGGC AAGCTGGCCC GACGCCAATG CCCTGGAACC CACACTCAGC
TACGAGCCAT TGGATGTAAT GAAGATGGAG CTACCGCCGG GCTATCGAGG TTATGGTGCA
GACAATGCCA TTGCTCACCC GGACACCGCC AAACGCGAGG CCGAAATTGC TGAACTGCTT
GCTGCCCTTG GCCCCAATGC CAGCCGAGAG GCAATCCAGC AGGCTCTGAT GCCCTTTGAG
TTACCCGAAT CACTGACACC GGCCAACGAA CGCTTGGCCG ACCGCCTCAA TGGGCTGGTG
AACATTGACA CCGCAGCGAG CCCAACTACG CCCAACATTG CCGGAGACGA TAATTCATGA
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| Protein sequence | MKLIYTDCLV VGAGLAGLRV AIAAKERGHD TLVLSLIPAK RSHSAAAQGG MQASLGNTVK
GLGDNEDVHF QDTVKGSDWG CDQTVARMFA HCAPKAVREL ANWGVPWTRV TKGPREVVVN
AERITIEEAE AAHGLINARD FGGTKKWRTC YTADGTGHSL LYAVDNKAIS LGIPVHERVE
ALSIIHDGER CHGVVARCLI TGELRAYIGK STTIATGGYG RIYEVSTNAI ICEGVGQALA
LETGVATLGN MEAVQFHPTA IVPVGILTTE GCRGDGGLLR DKDGYRFMPD YEPEKKELAS
RDVVSRRMTE HMRKGKGVDS PYGPHLWLDI TLLGRKHIET NLREVKEICE NFLGIDPAKD
WIPVRPTQHY SMGGIRTTPT GESPQLKGLF AVGEAACWDM HGFNRLGGNS LAETVVGGMI
IGKYVADFCD DNDLVLDTGL AKRYVDKVRT EIDELIEGKG TENPWELKSA MQRVMMDYVG
IFRNGPELNE AVKQLKALLA RSVNLGVSCK KRHANPELVE ALRVRRMLKV ALTVACGAAA
RTESRGAHAR EDFPQRNDKD WLCRTLASWP DANALEPTLS YEPLDVMKME LPPGYRGYGA
DNAIAHPDTA KREAEIAELL AALGPNASRE AIQQALMPFE LPESLTPANE RLADRLNGLV
NIDTAASPTT PNIAGDDNS
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