| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3218 |
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| Symbol | |
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| ID | 4605465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3810297 |
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| End bp | 3811256 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639782634 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_929090 |
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| Protein GI | 119776350 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGACCA CAGATTTAGC ACTGTTTGTT CGTGTGGCAG AGGCCGGCAG TATCAGTGCG
GCTGCCACCG AACTGGATAT GACGCCGGCA TCGGCCAGCG CAGCCATCAA GCGGCTGGAA
AAACAACTGG GCTCGCCGCT TTTTATCCGT ACCACGCGCA GTCTCAGGCT GTCACACGCC
GGAGAACGGT ATCTGGGCCA TTGCCGCGAG GCTCTCAGCG CCCTTGAATT GGGCCGCATG
GCGCTGTCCA GTGAACGCGG CACTGTGGAA GGCACTCTGA GGATTTCGGT GTCGTCGGAT
TTTGGTCGTA ATATCTTTTT ACCCTGGCTC GATGAACTGA TGGAACAGCA CCCCGGACTT
GAGGTGCAGC TGGAGCTGGG GGACAAGGTC AGCAGTCTGT TTCGCAGCAA TATCGACGTA
GCACTGCGCT ACGGTATGCC CCAGGACTCG GAGGCGGTGG CGTTCTCCCT TGGACACCTG
TCGCGCCAGC TTGCGGCCTC ACCTCGGTAT TTGGCCCGGG AGGGCACGCC GACAACCCCG
GCCGAGTTAG CCGCCCACCA ATGCCTGCTA TACAAACGTG CCGATAAGAC CCACGACCTG
TGGCATTTTT TCAGCGGTAA TGAAGAACAC AAGGTACGTG TCAGCGGCCG ACGCAGCTGC
AACGATGCCG AAATAGCGCG GCGCTGGGCG GTAGCGGGAC TGGGGCTGGT GTATAAGTCG
CGGTTGGACT TGGCCGCTGA CTTGCTCGAT GGCCGCCTGG TGCCCCTGCT GCCGGATTAT
GGTACCGAGC CGCTGGAGCT TTATTTGCTG TGCCCCGGAC GGGCCCAGGT GACACCGGCG
GTGTTGGCCC TGCGGGATAT GTTAAGGACC CGGGTGGCCG AACGTCTGGC CATGCTGGAC
AATTCGATGA CGGCGGGTCC TCCGCCAGAG AATGCCGCCA CCGATGAGGG ATGGGGGTGA
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| Protein sequence | MLTTDLALFV RVAEAGSISA AATELDMTPA SASAAIKRLE KQLGSPLFIR TTRSLRLSHA
GERYLGHCRE ALSALELGRM ALSSERGTVE GTLRISVSSD FGRNIFLPWL DELMEQHPGL
EVQLELGDKV SSLFRSNIDV ALRYGMPQDS EAVAFSLGHL SRQLAASPRY LAREGTPTTP
AELAAHQCLL YKRADKTHDL WHFFSGNEEH KVRVSGRRSC NDAEIARRWA VAGLGLVYKS
RLDLAADLLD GRLVPLLPDY GTEPLELYLL CPGRAQVTPA VLALRDMLRT RVAERLAMLD
NSMTAGPPPE NAATDEGWG
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