Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3216 |
Symbol | |
ID | 4605463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3808397 |
End bp | 3808723 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639782632 |
Product | thioredoxin |
Protein accession | YP_929088 |
Protein GI | 119776348 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.604019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA AAATTGTAAC CCTGAGCGAC GACAGCTTTG AAAACGACGT ACTGAAGTCT GAACTGCCAG TTCTGGTAGA CTTCTGGGCA GAATGGTGCG GCCCTTGCAA AATGATCGCC CCAATTCTGG ACGACGTAGC TGCCGAATAC GAAGGTAAGG TTACAGTTGC CAAGCTGAAC GTTGACCACA ACAACGCCTC TCCCGCCAAG TATGGCGTGC GTGGTATCCC AACGCTGCTG ATGTTCAAAG GCGGCGAACT GGTTGCTACC AAGGTTGGCG CCTTGTCCAA GACTCAATTG AAAGAGTTCA TCGACGCTCA GCTCTAA
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Protein sequence | MSDKIVTLSD DSFENDVLKS ELPVLVDFWA EWCGPCKMIA PILDDVAAEY EGKVTVAKLN VDHNNASPAK YGVRGIPTLL MFKGGELVAT KVGALSKTQL KEFIDAQL
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