| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3213 |
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| Symbol | |
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| ID | 4605460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3802776 |
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| End bp | 3805781 |
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| Gene Length | 3006 bp |
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| Protein Length | 1001 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782629 |
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| Product | putative oar protein |
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| Protein accession | YP_929085 |
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| Protein GI | 119776345 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000600939 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAA CACATAACCT GGCCCTCAAG GGGGCCTTTT CTGCCCGTAA AACACTGGCT
GCCGCAGCAG TGGGCGCGGC CTTGATGCTG TCAGCACCTG CCATGGCGGT GGATGGTTCC
AGTATCGTTA AGGGGCAGGT CGTCAGTGCT GAAGGTGCTG GCCTTGGTGG CGCCACCATT
ACTTTAAGGC ACAAAACCAA AGGTTTGGTG TACACAGTGT CTACCAACGA GAAGGGTGAA
TACCTGCTGC GCAACGTGCC CGTGGGCGAA TACGATATCG ACATCCACAA AGATGGCTAC
AGCGATTCCA AAGAGTCCGG CGTGCGGGTT GAAGTAGGTC AGGCGCTGAT CCTCGACGGC
CAGCTGTATG GTGCAGGTGA GACTTCCATG GAGCGTCTGG CGGTAACCGG CAGCATGATC
CGCCGGGTGG ATATGGCGTC TTCCACTTCG GGTGTGACCT TCTCTCAGGA AGACTTAAAC
CAGATGCCGG TGAACTCGGG TTTTGAAAGC ATTGCCCTGC TGGCTCCGGG TACCGCTGCA
CCCGGTGGTT CGTCGTTCCG TGGTGCTTCC AGCTTCGGCG GCGCATCGTC TGCCGAAAAC
GGCTATTACT TCAACGGGAT GAACGTTACC AGCATCCGCA CCGGTCTGGG GTCTATCAAT
CTGCCCTGGG AGGCCATCAG TCAGACCCAA GTGATGACAG GAGGTGTCAG CCCAGAATTC
GGCGGTGCCA TGGGTGGTAT CGTCAACGCC GTGTCCAAGT CCGGTGACAA TGAATTCAAG
TTCGGCACCC AGATACGTTG GGAGCCGGAC AGCCTGCGCG CCAATCACGA CTCGATTTTC
GACAGTGCCG GCAATATTTC CTCCAACACC ATGCAGGATG GCTACGATTT CCGTGAGCTG
CAATTGTGGG CCAGCGGCGC CATCATTCAG GATAAGTTGT TCTACTACGG TTTGTTCAAC
CCTCGCCGCG ATGACAGCGA CTGGGCCGGA CAAACCACAG CAGGTCACAG AGAGCGTGAA
GAAGACCGCT GGTTTGCCAA GCTTGACTGG TACATCTCGG AAGATCACTC CATTGGCCTG
TCAGCCATGA GCAACGAGCG CACCTGGGAT ACAGGCACCT TCGCCTACGA CTGGGAAACC
AACGAGGTGG GCGACCAGAT TGGTGAAAAC GCTCCCGGCC GCGATGGCGG CAAGGTTTAC
AGCCTGAACT ACAACGGTTA CTTCACCGAC AGCTTCTCGG TGTCGGCCGT GGTGGGGCGT
ACTTCAGAAA ATATCGATAA CGTGGTGGCC TCCTCCAATC CATCGGTATA CGACTATCGC
ACCAGCACCA CCCTCAGCCA GCACACCAAC TCGTCAGTGT CTGAGCAGGA GTTTATCCGC
GATCAGGCGC GTATCGACTT TAACTGGGAT CTGGACAATC ACTCACTGCA ATTCGGTGTG
GATTACACCC GGGTGCTGGT GGACTACACC TCGGCCCAGA ACGGCATTGG CGATGCCCAG
GGCTGGTGGG GCGTGAAGAC CGCCGGTAAC AACAGTGTGT CCGGCGCTGC GGCCGGCGAA
GACTATATTG AGCGCCGCGT ACGCACCCGC TACACCGACT CAGAAATCAC TTCGCTGGCG
TTTTATGCCA ACGATTCCTG GCAGGTGACC GACCAGCTGG TGCTGAACCT TGGCTTGCGT
TACAGCGGCT TTGAAAACAC GGTTTCCGAT GGTCGCGCCT ATGTGTCCAT CGACAACCAA
ATCGCCCCGC GTCTGCAGGC CATCTACGAT CTGCACGGCG ACGGCAGTGC CAAGGTGTAC
GCCACTTATG GCCGTTACTT CCAGCCGGTG TCGGCCAACA TGAACATCAC CCAGGGCTCG
TCCTCCATCG AGTGGTTTGA GTATTTCGCG CTGGATCAGG TGGATGGCAG CGGTGCCCCT
GTGCTCTTGC CTGATGGCTC CCCAAGCCGC GGCGATATGC TGCGTGACCG CTACTGGCGT
CAGCGCGGTA TCACTGAGCC GGGGCTGATT GCATCAAGCA GCCTCAAGCC CATGTACAGC
GATGAGTTTA CCCTCGGCTA TCAGCAGGAG CTGTTCGATA CCATGAGCGG CGGCGTGCGC
TTTATTTACC GCGACCTTGG CCGCAGCGTG GAAGACACAG ACGTGGGCCC AGTGCTGGCG
AAGAAGCTGG CGGAGCTCGG CATTGCCGAC AACGTGGGTC AGGGCTCTTA CTACGTGCTC
AATAACCCGG GTGAAGACAT CACCATGTCC TACGACTTCG ATGGTGATGG ACAGGTGGAT
AATGTCACTC TTACTCAGGA TGAGCTGCAA CTGCCCGAAG CCAAGCGTAA GTATCTGGCG
GTGGAGCTGA CTCTGGATGG CCGTGTGAAT GACGACCTGA CTATCAACAG CTCTTACACC
TGGTCACACA GCTACGGTAA TACCGAAGGC CTTGTGAAGA CCGACAACGA TCAGGCCGAT
CCGGGTTGGA CGACCTCCTA CGACTATGCT GACCTGATGG ACCACGGCTA TGGTGACCTG
CCAAACGATC ACCGCCATGC GTTTAAGGTG AGCGGTGCTT ACAACATCAC CGACAGCCTG
GTACTGGGTC TGGTGGCGCG CACTACCTCG GGCCGTCCGC AGAGCTACTT CTCCCAGCAC
CCTCAGGGTG TGGACAGCTG CGCCGCAGGC AGCCCATGGG AGGATTGTAT CAGCCGCTAC
TACGACCATG TGTCGCACTA CGATGAGAAC GGCAACCCAT CTCCCCGTGG CAGCGCGGGT
AATCTGCCCT GGGTGACCAA TGTGGATCTG TCGCTGACCT ATAGTACCGA ACTGTTTGGT
GGTGATTTAA TGCTTAAGGG CACTGTGTAC AATCTGCTCA ATGCTGACAG CGCCACCTCG
GTGTGGGAAG AGCGTACCCG TTACGCCGAT ACTGCCTCGG GTCTGGAGCT GAACCCGGAC
TACGGCATGG TGACCGGTCG TCAGGAAGCC CGTTACATGT CGCTGATTGC CCGCTACGAG
TTCTGA
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| Protein sequence | MNQTHNLALK GAFSARKTLA AAAVGAALML SAPAMAVDGS SIVKGQVVSA EGAGLGGATI
TLRHKTKGLV YTVSTNEKGE YLLRNVPVGE YDIDIHKDGY SDSKESGVRV EVGQALILDG
QLYGAGETSM ERLAVTGSMI RRVDMASSTS GVTFSQEDLN QMPVNSGFES IALLAPGTAA
PGGSSFRGAS SFGGASSAEN GYYFNGMNVT SIRTGLGSIN LPWEAISQTQ VMTGGVSPEF
GGAMGGIVNA VSKSGDNEFK FGTQIRWEPD SLRANHDSIF DSAGNISSNT MQDGYDFREL
QLWASGAIIQ DKLFYYGLFN PRRDDSDWAG QTTAGHRERE EDRWFAKLDW YISEDHSIGL
SAMSNERTWD TGTFAYDWET NEVGDQIGEN APGRDGGKVY SLNYNGYFTD SFSVSAVVGR
TSENIDNVVA SSNPSVYDYR TSTTLSQHTN SSVSEQEFIR DQARIDFNWD LDNHSLQFGV
DYTRVLVDYT SAQNGIGDAQ GWWGVKTAGN NSVSGAAAGE DYIERRVRTR YTDSEITSLA
FYANDSWQVT DQLVLNLGLR YSGFENTVSD GRAYVSIDNQ IAPRLQAIYD LHGDGSAKVY
ATYGRYFQPV SANMNITQGS SSIEWFEYFA LDQVDGSGAP VLLPDGSPSR GDMLRDRYWR
QRGITEPGLI ASSSLKPMYS DEFTLGYQQE LFDTMSGGVR FIYRDLGRSV EDTDVGPVLA
KKLAELGIAD NVGQGSYYVL NNPGEDITMS YDFDGDGQVD NVTLTQDELQ LPEAKRKYLA
VELTLDGRVN DDLTINSSYT WSHSYGNTEG LVKTDNDQAD PGWTTSYDYA DLMDHGYGDL
PNDHRHAFKV SGAYNITDSL VLGLVARTTS GRPQSYFSQH PQGVDSCAAG SPWEDCISRY
YDHVSHYDEN GNPSPRGSAG NLPWVTNVDL SLTYSTELFG GDLMLKGTVY NLLNADSATS
VWEERTRYAD TASGLELNPD YGMVTGRQEA RYMSLIARYE F
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