| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3209 |
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| Symbol | |
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| ID | 4605456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3798302 |
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| End bp | 3799105 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782625 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_929081 |
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| Protein GI | 119776341 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGTT ATCTGGACAT TGCCGTTAAC CTGATTGGCA GTGCCCTCGA ATCCGACATT
GAGGCCGTAA TCGCCGGCGC CGATGCTGCC GGTGTGTCGC CGTTGATTGT TATTGGCAGC
AGCCTCGAAG AGAGCGAGGC GGTTCTGGGC GCCTGCCAGC GTTTCCCCGG CAAGCTTTAT
GGCACTGCCG GGGTGCACCC CCATCATGCC TCGAGCTGGC ATCAGCACAG CACGGGACTG
CAGCGCCGTC TGTGCGGTGA GAGTGCCATA GTCGCCGTGG GTGAGTGTGG CCTCGACTAT
AACCGGGACT TTTCTCCCCG TCCCAAGCAG CGTGAAGCCT TTGCCGCCCA ACTGGCACTG
GCCTGTGAAT TGGGAAAGCC TGTTTTGATG CACGAGCGCG ATGCCCATGA TGACTTCATC
GCCATTGTGA GAGAGCATCG CAGCCAACTC AGTGGCGCCC TGTTGCACTG CTTTACCGGC
ACGGCCGCGC AGATGGAAGC CTACATAGAC CTTGGACTGC ATCTGGGTAT TACCGGCTGG
GTTTGTGATG AGCGCCGCGG TCAGGAATTG GCCGCACTGG TGAAAGATAT TCCCATCGAA
CGGCTGCTGA TTGAGACCGA TAGCCCCTAT CTGCTGCCAA GGTCCATGCG GCCCAAGCCC
AAATCAGGTA AAAACCTGCC GCAATATTTA CCCTATATCG CCAACGAGAT AGCCCGCCTT
CGAGGGGAGG AGCCGGACGA CTTTTCCCGG CAGGTATACC ACAACAGCCT CACATTCTTT
GGCTTGGACA GCGCCCATGG GTAG
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| Protein sequence | MPRYLDIAVN LIGSALESDI EAVIAGADAA GVSPLIVIGS SLEESEAVLG ACQRFPGKLY
GTAGVHPHHA SSWHQHSTGL QRRLCGESAI VAVGECGLDY NRDFSPRPKQ REAFAAQLAL
ACELGKPVLM HERDAHDDFI AIVREHRSQL SGALLHCFTG TAAQMEAYID LGLHLGITGW
VCDERRGQEL AALVKDIPIE RLLIETDSPY LLPRSMRPKP KSGKNLPQYL PYIANEIARL
RGEEPDDFSR QVYHNSLTFF GLDSAHG
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