Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3202 |
Symbol | |
ID | 4605449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3793193 |
End bp | 3793948 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639782618 |
Product | ubiquinone/menaquinone biosynthesis methlytransferase UbiE |
Protein accession | YP_929074 |
Protein GI | 119776334 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACG GCACATCAAA TAGTACTCAC TTTGGTTTCA AGACAGTCGA AGCCGATAAA AAGGCGGATC TGGTTGCCGG TGTATTTCAC TCGGTTGCAG CCAAGTACGA CATCATGAAC GACGTGATGT CTTTCGGGAT CCATCGCCTG TGGAAGCGAT TCACCATCGA GACCGCGGGC GCTCGCCCCG GCATGAAGGT ACTGGATCTG GCCGGGGGTA CTGGCGATCT GACCGCCAAG TTTTCCCGTT TGGTAGGCGA TCGCGGCGAA GTGGTTCTGG CCGACATCAA CGACTCCATG CTGAAAGTGG GCCGCGCCAA ACTCAGAGAT CTGGGTGTGG TGGGTAACGT CAGCTATGTG CAAGCCAACG CCGAGGCGCT GCCGTTTCCA GACAATCATT TCGACATCAT CACCATCGCC TTTGGTCTGC GTAACGTGAC TGACAAGGAC GCGGCCCTGC GCTCCATGCA ACGGGTGCTC AAGCCCGGTG GCAAACTGCT GGTACTGGAA TTTTCCAAGC CGCAGCACGA AGTGATGCGT AAACTGTACG ACCTCTACAG CTTCAAAATT CTGCCCAAAA TGGGCGAGTT TATTGCCCAG GATGCCGGCA GCTATGAGTA TCTGGCTGAA TCCATCCGGA TGCACCCGGA TCAGGATACC CTCAAGGGCA TGATGCAGGA CGCTGGCCTG GAGCAGGTAG ACTACATCAA CATGACCGAC GGCGTTGTTG CACTGCACCG GGGTTACAAG TTCTGA
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Protein sequence | MSDGTSNSTH FGFKTVEADK KADLVAGVFH SVAAKYDIMN DVMSFGIHRL WKRFTIETAG ARPGMKVLDL AGGTGDLTAK FSRLVGDRGE VVLADINDSM LKVGRAKLRD LGVVGNVSYV QANAEALPFP DNHFDIITIA FGLRNVTDKD AALRSMQRVL KPGGKLLVLE FSKPQHEVMR KLYDLYSFKI LPKMGEFIAQ DAGSYEYLAE SIRMHPDQDT LKGMMQDAGL EQVDYINMTD GVVALHRGYK F
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