Gene Sama_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3202 
Symbol 
ID4605449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3793193 
End bp3793948 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content56% 
IMG OID639782618 
Productubiquinone/menaquinone biosynthesis methlytransferase UbiE 
Protein accessionYP_929074 
Protein GI119776334 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG GCACATCAAA TAGTACTCAC TTTGGTTTCA AGACAGTCGA AGCCGATAAA 
AAGGCGGATC TGGTTGCCGG TGTATTTCAC TCGGTTGCAG CCAAGTACGA CATCATGAAC
GACGTGATGT CTTTCGGGAT CCATCGCCTG TGGAAGCGAT TCACCATCGA GACCGCGGGC
GCTCGCCCCG GCATGAAGGT ACTGGATCTG GCCGGGGGTA CTGGCGATCT GACCGCCAAG
TTTTCCCGTT TGGTAGGCGA TCGCGGCGAA GTGGTTCTGG CCGACATCAA CGACTCCATG
CTGAAAGTGG GCCGCGCCAA ACTCAGAGAT CTGGGTGTGG TGGGTAACGT CAGCTATGTG
CAAGCCAACG CCGAGGCGCT GCCGTTTCCA GACAATCATT TCGACATCAT CACCATCGCC
TTTGGTCTGC GTAACGTGAC TGACAAGGAC GCGGCCCTGC GCTCCATGCA ACGGGTGCTC
AAGCCCGGTG GCAAACTGCT GGTACTGGAA TTTTCCAAGC CGCAGCACGA AGTGATGCGT
AAACTGTACG ACCTCTACAG CTTCAAAATT CTGCCCAAAA TGGGCGAGTT TATTGCCCAG
GATGCCGGCA GCTATGAGTA TCTGGCTGAA TCCATCCGGA TGCACCCGGA TCAGGATACC
CTCAAGGGCA TGATGCAGGA CGCTGGCCTG GAGCAGGTAG ACTACATCAA CATGACCGAC
GGCGTTGTTG CACTGCACCG GGGTTACAAG TTCTGA
 
Protein sequence
MSDGTSNSTH FGFKTVEADK KADLVAGVFH SVAAKYDIMN DVMSFGIHRL WKRFTIETAG 
ARPGMKVLDL AGGTGDLTAK FSRLVGDRGE VVLADINDSM LKVGRAKLRD LGVVGNVSYV
QANAEALPFP DNHFDIITIA FGLRNVTDKD AALRSMQRVL KPGGKLLVLE FSKPQHEVMR
KLYDLYSFKI LPKMGEFIAQ DAGSYEYLAE SIRMHPDQDT LKGMMQDAGL EQVDYINMTD
GVVALHRGYK F