Gene Sama_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3195 
Symbol 
ID4605442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3787259 
End bp3787687 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content57% 
IMG OID639782611 
Productacetyl-CoA carboxylase, biotin carboxyl carrier protein 
Protein accessionYP_929067 
Protein GI119776327 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGG ATCTGCGAAA AATCAAAAAG CTGATCGAGC TGGTACAGGA GTCCGGCATC 
AATGAGCTGG AAGTGAAAGA AGGCGAAGAG TCGGTGCGCA TCATCCGCCA TGGCAATCTG
CCACCGCAGA CGGTAATCAC TGAGATCAGC CCCAAGGCAA CCAGCAGCGT TCAGGCCCAT
GAAGCAGGCC ACAGAGTGCT CTCCCCCATG GTGGGCACCT TTTACCGCGC TCCCAGCCCC
GAAGCCCGTC CTTTTGTGGA GCTGGGCACA GAGGTGGCCG TGGGCGATAC CCTCGCGGTG
ATTGAAGCCA TGAAAATGAT GAACCAAATA GCCGCCGACC GCGCCGGGAC AGTGAAAGCG
ATTCTGGTAG AAAACGGCAC CGCTGTGGAG TTTGACCAAC CCCTGTTTGT GATTGGTGAT
GCCGACTGA
 
Protein sequence
MAMDLRKIKK LIELVQESGI NELEVKEGEE SVRIIRHGNL PPQTVITEIS PKATSSVQAH 
EAGHRVLSPM VGTFYRAPSP EARPFVELGT EVAVGDTLAV IEAMKMMNQI AADRAGTVKA
ILVENGTAVE FDQPLFVIGD AD