| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3180 |
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| Symbol | |
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| ID | 4605427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3770257 |
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| End bp | 3771672 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782596 |
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| Product | cytochrome c, putative |
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| Protein accession | YP_929052 |
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| Protein GI | 119776312 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACAG TTTTCTCCCA ATGGGCCCTT GCCCCCCTGT CCGGCGTGAT GCTGCTGGGC
AGCGGATTGG CGATGGCCGA CAATCCCCAC AAGGAAGCCA TCGAAGGCCC CTTCGCCTCA
GGTACCGAGG TGACCCAGCA GTGCCTGGCG TGCCACGAAG ATGAGGCCCA CGATTTTATG
AAAACCTCCC ACTGGAGCTG GAGCCTGACC CAGGAGCTGC CCGGTCGCAC AGTTGAGCGG
GGAAAGAAGA ACGCCATCAA CAACTTCTGT ACTTCCATCG CCGGTAACGA GCCACGCTGC
ACCAGCTGTC ACGCGGGTTA CGGCTGGAAG GACAGTAGCT TTGATTTTGC CGACGCTTCC
AAAGTGGACT GTCTGGTGTG TCACGACACC ACAGGCACCT ATATTAAAGA TCCCGCAGGC
GCCGGTGAGC CACTGGCCAA GGTGGATTTG GAGAAGGTAG CCAAAAATGT CGGTAAGCCA
GTGCGCGACA ACTGCGGCAG CTGCCACTTC TACGGTGGCG GCGGTGATGC GGTGAAACAC
GGGGATCTGG ACTCTTCCAT GGCCTACCCC GACAAAGCCA CCGATGTGCA CATGGATGCA
GATGGCAACG ACTTCCAATG TCAGGCTTGC CATACCACTG AGTCCCACGC CATCAGCGGT
AATGCCATGG GTGTATCTCC CGGTGGTATC GACCATATTG GCTGTGAAAA CTGCCACGAA
GGCGCACCGC ACAAAAACAA GAAAATCAAC GAACACACAG CCACTGTGGC CTGCCAGACC
TGCCACATCC CCTTCTTCGC CCGTAATGAA GCGACCAAGA TGAGCTGGGA CTGGTCAACG
GCGGGTCAGG ACAGGGAAGA AACCCTGGAC GAGTACGGCC GCAAGACCTT CCAGAAGAAG
AAAGGCAGCT TCACCTGGGG CAAGATGGTT AAGCCCGCTT ACGCCTGGTA CAACGGCAAA
GCCGGTGCCT ACATGGCTGG CGACCCCATC AAGGCCGATG AAGTGACCCG TCTTTCCTAT
CCTCTCGGGG ATATTCAGGA TGCGGGCGCA AAAATCTACC CCTTCAAGGT GCACACAGGT
AAGCAAATCT ATGACAAGAA ACACAATATT CTTGCCACAG CCAAAACCTA CGGTGCCGGC
GGCTACTGGA CCGAGTTTGA CTGGGATAAA GCGGCAAAAC TGGGGATGGA GGCCAACCCG
ACGCTGAAGG CCAAGGGGAT TGCTTACAGC GGCGAATATG GTTTTGCGCC AACTGAAATG
TGGTGGAGAA TCAACCACAT GGTGTCAAAA AAAGAGGAAG CCCTCAAGTG TAATGCCTGC
CACAACGGCG GCGACCGTCT CGACTGGAAG GCTCTGGGTT ACGAAGGTGA CCCGATGAAA
AACAAACAGG GCCCAAGACA CAACCAGAGC AAGTGA
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| Protein sequence | MRTVFSQWAL APLSGVMLLG SGLAMADNPH KEAIEGPFAS GTEVTQQCLA CHEDEAHDFM
KTSHWSWSLT QELPGRTVER GKKNAINNFC TSIAGNEPRC TSCHAGYGWK DSSFDFADAS
KVDCLVCHDT TGTYIKDPAG AGEPLAKVDL EKVAKNVGKP VRDNCGSCHF YGGGGDAVKH
GDLDSSMAYP DKATDVHMDA DGNDFQCQAC HTTESHAISG NAMGVSPGGI DHIGCENCHE
GAPHKNKKIN EHTATVACQT CHIPFFARNE ATKMSWDWST AGQDREETLD EYGRKTFQKK
KGSFTWGKMV KPAYAWYNGK AGAYMAGDPI KADEVTRLSY PLGDIQDAGA KIYPFKVHTG
KQIYDKKHNI LATAKTYGAG GYWTEFDWDK AAKLGMEANP TLKAKGIAYS GEYGFAPTEM
WWRINHMVSK KEEALKCNAC HNGGDRLDWK ALGYEGDPMK NKQGPRHNQS K
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