| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3177 |
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| Symbol | |
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| ID | 4605424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3765105 |
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| End bp | 3767387 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782593 |
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| Product | polysulfide reductase, subunit A |
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| Protein accession | YP_929049 |
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| Protein GI | 119776309 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGAGC TCTGCAGGCG CGACTTTCTC AAAGGTGCAG GTGCGGCCGG GGCGGGGTGT
GCCCTGGCCA CAGCGCTGCC TGGGACGCTG GCGGCCATGG GGGCCCAACC CCTCAGTGGC
AGCGAAAAAG CCATTCCGAG TATTTGTGAA ATGTGCTCCA CCCGTTGCCC GATTTCGGCA
AGGGTTTTGG ATGGCAAGGC CGTGTATATC GAAGGCAACG CAGCAGCCAA GTCCTTTGGC
GGCAAGGTAT GTGCCCGGGG CGGTGCCGGC CACAGCTTGC TGTATGACCC ACAGCGGCTG
GTAAAACCCC TGAAACGCGT CGGCGAGCGC GGTGAAGGTA AGTGGCAGGA AATCGAATGG
AGCGAAGCCT ACGGCATTCT TGCCCAGCGG CTCGAACAAA TCCGCCGCGA CCATGGCGCC
GAAACCGTGG CCTTTTCATC CAAATCGGGC TCGCTGTCGG GGCATCTGTT CCACTTTGCC
AAGGCCTTTG GCAGCCCCAA TACGTTTACT CACGCAACCA CCTGCCCCGG CGCCTATGTG
GTGGCCGCTA AGGCCATGTT TGGCGGAAAG GTGAAGCGGG ATTTGGGTAA TTCCAAATAC
ATCATCAACT TCGGCCATAA CCTTTACGAA GGCATCAATA TGTCCGAAAC CCGCGCCATG
ATGAAGGCGC AAACCGACAA GCGCGCCAAG CTGGTGGTGT TTGAGCCGCG CTTCTCCATC
GTGGCCGATA AAGCCGATGA GTGGTATGCC ATCCGTCCCG GCTCTGATGT GGCCGTGGCG
CTGGCGCTGT GCCATGTGCT GATTAGCGAG AACCTCTACG ACAAGGCCTT TATCGAGCGT
TACGTGGAAG GCTTCGAGGC CTTTGCCGCC GAAGTCAGCG CCTATACCCC CGAGTGGGCA
GAAACCATTT CCGATGTGCC CGCCCAAGAC ATTCGCCGCA TTGCCCGCGA ATTTGCCAAG
GCCGCGCCCC ATGCGGTGGT GGACTTTGGC CACCGTGCCA CCTTCACCCC GGAAGAGTTT
GATATGCGCC GGGCCCTGTA CGCGGCCAAC GTACTGATTG GCAACTTTGA GCGCAAGGGC
GGTATCTACT TTGGCCAGAA GGCGGCCGGG TACAACAAGC TTGCAGGAGA ATCCGTGGCG
CCTGTGTTGG GTAAGCCCGG CGTGGCCGAC ATGCCCAAGC CCACAGCCAA GCGTATCGAC
CAGATGGATG AGCAGTACGC CATGATGTGG AGCGAGGGCG GCATTTATCA GTCGGTTATC
GATGCCACCC TGGAGGCCAA ACCCTACCAG CTGCGCGGCT GGGTAATGTG CCGTACCAAC
CCGATGCAAA CCATGACTGA CCGCGCCAAG GTGGTTGAGT CGCTGAAAAA GCTCGATTTT
GTGGCCGTGG TGGACGTGTA TATCAGCGAA ACCGCCGCCT GGGCCGATTT GATTTTGCCC
GAGTCCACCT ACCTTGAGCG CGATGAGGAG ATCAGCGACA AGTCCGGCAA GAGCCCCGGC
TACTACGTGC GTCAGCGGGT GGTGGACGTG ATTGGCGATA CCAAGCCGTC ATGGCAAATC
TTCCGCGAGC TGGGTCTTAA GATGGGCATG GACAAGTACT ACCCCTGGGA GACCATGGAA
ACCCTGCAAC TGCTGCAGGC CAACAAGGAT GTGGCGCTTT TGAATCACAT CAAGGAAAAG
GGCTTTGTCA GCTATGGCAA GCCGTTGATG CTGCGTGAAA AATCCATGGT GCAGGAGTTT
GTGACTGCCT ATCCAGGCGC CCATGTCGCG GATGAGGACG GCAGTTACGC CAGCCTGCTC
AAGTTCAAAA CCCCCAGCGG CAAGATAGAA CTGGTGAGCC CCAAGGTGGA AGCCATGGCC
CCGGGCCGCG GCGGCATCAA GTACCGGCCC GTGACCTTAA AACAGCCCAA TGAGCTCTAC
TTCATTCAGG GTAAGGTGGC GGTGCACACC AATGGTGCCA CCCACAATAT CCCTATGCTC
GCCAATCTGA TGTCGGACAA CGCCGTGTGG GTGCATCCCA GCACAGCCGA GGCGCTGGGT
ATCAAGGATG GTGATGCTAT TCGGCTTAAA TCCAGCGTGG GCGTGGAAGA AGGCAAGGCG
CTCGTCACTA AGGGCATTCG CCCGGATACC CTGTTTGCTT ACATGGGCTT TGGCTCGAAA
AACCGTGAGC TGGTGCGTGC CTCCGGCAAG GGGATCCACT GTGGAAACCT GCTGCCCAAT
ATGACGGCGC CTGTCTGCGG CATGAACGTG CACACCACGG GTGTGATCCT GGAAAAGGCA
TAA
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| Protein sequence | MIELCRRDFL KGAGAAGAGC ALATALPGTL AAMGAQPLSG SEKAIPSICE MCSTRCPISA
RVLDGKAVYI EGNAAAKSFG GKVCARGGAG HSLLYDPQRL VKPLKRVGER GEGKWQEIEW
SEAYGILAQR LEQIRRDHGA ETVAFSSKSG SLSGHLFHFA KAFGSPNTFT HATTCPGAYV
VAAKAMFGGK VKRDLGNSKY IINFGHNLYE GINMSETRAM MKAQTDKRAK LVVFEPRFSI
VADKADEWYA IRPGSDVAVA LALCHVLISE NLYDKAFIER YVEGFEAFAA EVSAYTPEWA
ETISDVPAQD IRRIAREFAK AAPHAVVDFG HRATFTPEEF DMRRALYAAN VLIGNFERKG
GIYFGQKAAG YNKLAGESVA PVLGKPGVAD MPKPTAKRID QMDEQYAMMW SEGGIYQSVI
DATLEAKPYQ LRGWVMCRTN PMQTMTDRAK VVESLKKLDF VAVVDVYISE TAAWADLILP
ESTYLERDEE ISDKSGKSPG YYVRQRVVDV IGDTKPSWQI FRELGLKMGM DKYYPWETME
TLQLLQANKD VALLNHIKEK GFVSYGKPLM LREKSMVQEF VTAYPGAHVA DEDGSYASLL
KFKTPSGKIE LVSPKVEAMA PGRGGIKYRP VTLKQPNELY FIQGKVAVHT NGATHNIPML
ANLMSDNAVW VHPSTAEALG IKDGDAIRLK SSVGVEEGKA LVTKGIRPDT LFAYMGFGSK
NRELVRASGK GIHCGNLLPN MTAPVCGMNV HTTGVILEKA
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