Gene Sama_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3176 
Symbol 
ID4605423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3764525 
End bp3765091 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content58% 
IMG OID639782592 
Productpolysulfide reductase, subunit B 
Protein accessionYP_929048 
Protein GI119776308 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA GATACGTAAT GGTGCACGAC GAGAACAAGT GCATCGGCTG TCAGGCCTGT 
AGCGTGGCTT GCCGCAGCAT TAATCAGGTA CCCGATGGCG TAAGCCGCTT GCAGGTGCGC
ATCGAAGGCC CCTTTGGTGA GGCGCCCCAT TTGCACTTCA AGTACAACCG GGTGTCGTGC
CAGCAGTGTG AGGATGCGCC CTGCGTCAAG GTGTGTCCGA CCGGCGCCGC TTACGTTGGT
GACGATGGCA TTGTGTCCAT CAAGGCCGAG AAGTGCGTGG GCTGCATGTA CTGCGTGGCC
GCCTGCCCCT ACAAGGTGCG CTTTATGAAC CCTGAAACCA GGGTGGCGGA CAAGTGCAAC
TTCTGTAAGG AAACCCGTCT TGCCCGGGGT GAACAGCCCG CCTGTGTCAC TGTATGCCCA
ACAGATGCGC TCTGTTTCGG TGATGCAGCT GACCCTGCCA GCGAGGTGTC CAAACTGCTT
GCCACCAAGG TGAGTTATCA GGACAAGACA CATCTTGGCA CCAAACCCAG GCTGTACCGT
ATTCCAGCCA AGCGTGGAGG TATCTGA
 
Protein sequence
MSKRYVMVHD ENKCIGCQAC SVACRSINQV PDGVSRLQVR IEGPFGEAPH LHFKYNRVSC 
QQCEDAPCVK VCPTGAAYVG DDGIVSIKAE KCVGCMYCVA ACPYKVRFMN PETRVADKCN
FCKETRLARG EQPACVTVCP TDALCFGDAA DPASEVSKLL ATKVSYQDKT HLGTKPRLYR
IPAKRGGI