Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3176 |
Symbol | |
ID | 4605423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3764525 |
End bp | 3765091 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639782592 |
Product | polysulfide reductase, subunit B |
Protein accession | YP_929048 |
Protein GI | 119776308 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAAA GATACGTAAT GGTGCACGAC GAGAACAAGT GCATCGGCTG TCAGGCCTGT AGCGTGGCTT GCCGCAGCAT TAATCAGGTA CCCGATGGCG TAAGCCGCTT GCAGGTGCGC ATCGAAGGCC CCTTTGGTGA GGCGCCCCAT TTGCACTTCA AGTACAACCG GGTGTCGTGC CAGCAGTGTG AGGATGCGCC CTGCGTCAAG GTGTGTCCGA CCGGCGCCGC TTACGTTGGT GACGATGGCA TTGTGTCCAT CAAGGCCGAG AAGTGCGTGG GCTGCATGTA CTGCGTGGCC GCCTGCCCCT ACAAGGTGCG CTTTATGAAC CCTGAAACCA GGGTGGCGGA CAAGTGCAAC TTCTGTAAGG AAACCCGTCT TGCCCGGGGT GAACAGCCCG CCTGTGTCAC TGTATGCCCA ACAGATGCGC TCTGTTTCGG TGATGCAGCT GACCCTGCCA GCGAGGTGTC CAAACTGCTT GCCACCAAGG TGAGTTATCA GGACAAGACA CATCTTGGCA CCAAACCCAG GCTGTACCGT ATTCCAGCCA AGCGTGGAGG TATCTGA
|
Protein sequence | MSKRYVMVHD ENKCIGCQAC SVACRSINQV PDGVSRLQVR IEGPFGEAPH LHFKYNRVSC QQCEDAPCVK VCPTGAAYVG DDGIVSIKAE KCVGCMYCVA ACPYKVRFMN PETRVADKCN FCKETRLARG EQPACVTVCP TDALCFGDAA DPASEVSKLL ATKVSYQDKT HLGTKPRLYR IPAKRGGI
|
| |