Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3175 |
Symbol | |
ID | 4605422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3763536 |
End bp | 3764522 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639782591 |
Product | polysulfide reductase, subunit C |
Protein accession | YP_929047 |
Protein GI | 119776307 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATA TCTGGGGTGA TATGAGTCAG TACGACGGCA TTACCTGGCA TTGGGTGATT GCGGTGTACC TCTTTATGGC CGGTTTGTCG GCGGGCAGCT TGTTGATGGG GATTGGTCTG CGCTGGTATC GTGGCCAAAC TCAGGGCAGT AGCCAGAGCC GTGCTGAAAG CGCCGTGCTC AAAGCCGCCG CCTTGATTGC GCCCATCGCC ATTTGTCTTG GGATGCTGTG TCTGGTGTTT GACCTGACCA AACCGTTCCA CTTCTGGCTG ATTTTGATTA ACTACAACTT AAGCTCGGTG ATGTCGATTG GGGTGATAGC GCTCCTCGCA TACATTCCGC TGACCTTTGT CTATGCGCTG GTGGTGCTCA AAGATGAGCT GCCAAAGTGT GGTTTGGGCT TCCTGGGCGG CCTCGCCGAT AGCCTCGGCA AGCTTCGCGG CATGCTGGAA GGAGCGCTCT TTGTGCTGTC GCTGGTGGTG GGGGCCTATA CAGGTTTCCT GATTTCCGCC ATGAACGCCT ATCCCATGCT CAATACCGCG GTGCTGCCTG CGCTGTTTTT GGTATCGGGT TTATCGGCGG GTGCGGCGGC CAACAGCCTG CTGGCGGTGA CGATGTTTGG TGGCGATAAG CATAGCCCCC AGGCTTCCGG CTCCCGCTCT GGTGGCTTCT CTGGTGACCT TGAGCGTCAG CACGCCTTCG AGCTGCCGGT GATGGGCATG GAAATGCTGT TCCTGTTTAT GCTGTTTACC GCGCTGTATT TCAAAGGTGG CGCGGCGGCA GCGGCGCTGG CATCGATCTC TGGCGGACTG TGGGCAGCTG TATTCTGGAT TGGGGTAGTG GCTATCGGCT TTGGGGTGCC ACTGATGATG CGCCTCAGTG GTAAACACGG CCGCAGCGCC ATGGTCACAG CGGCCTGCGC GAGCCTGATT GGGGTGCTGG CACTGCGGCA TTTTATCCTT TACGCCGGTC AATCTTATCT GTCTTGA
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Protein sequence | MNNIWGDMSQ YDGITWHWVI AVYLFMAGLS AGSLLMGIGL RWYRGQTQGS SQSRAESAVL KAAALIAPIA ICLGMLCLVF DLTKPFHFWL ILINYNLSSV MSIGVIALLA YIPLTFVYAL VVLKDELPKC GLGFLGGLAD SLGKLRGMLE GALFVLSLVV GAYTGFLISA MNAYPMLNTA VLPALFLVSG LSAGAAANSL LAVTMFGGDK HSPQASGSRS GGFSGDLERQ HAFELPVMGM EMLFLFMLFT ALYFKGGAAA AALASISGGL WAAVFWIGVV AIGFGVPLMM RLSGKHGRSA MVTAACASLI GVLALRHFIL YAGQSYLS
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