Gene Sama_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3175 
Symbol 
ID4605422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3763536 
End bp3764522 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content57% 
IMG OID639782591 
Productpolysulfide reductase, subunit C 
Protein accessionYP_929047 
Protein GI119776307 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3301] Formate-dependent nitrite reductase, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA TCTGGGGTGA TATGAGTCAG TACGACGGCA TTACCTGGCA TTGGGTGATT 
GCGGTGTACC TCTTTATGGC CGGTTTGTCG GCGGGCAGCT TGTTGATGGG GATTGGTCTG
CGCTGGTATC GTGGCCAAAC TCAGGGCAGT AGCCAGAGCC GTGCTGAAAG CGCCGTGCTC
AAAGCCGCCG CCTTGATTGC GCCCATCGCC ATTTGTCTTG GGATGCTGTG TCTGGTGTTT
GACCTGACCA AACCGTTCCA CTTCTGGCTG ATTTTGATTA ACTACAACTT AAGCTCGGTG
ATGTCGATTG GGGTGATAGC GCTCCTCGCA TACATTCCGC TGACCTTTGT CTATGCGCTG
GTGGTGCTCA AAGATGAGCT GCCAAAGTGT GGTTTGGGCT TCCTGGGCGG CCTCGCCGAT
AGCCTCGGCA AGCTTCGCGG CATGCTGGAA GGAGCGCTCT TTGTGCTGTC GCTGGTGGTG
GGGGCCTATA CAGGTTTCCT GATTTCCGCC ATGAACGCCT ATCCCATGCT CAATACCGCG
GTGCTGCCTG CGCTGTTTTT GGTATCGGGT TTATCGGCGG GTGCGGCGGC CAACAGCCTG
CTGGCGGTGA CGATGTTTGG TGGCGATAAG CATAGCCCCC AGGCTTCCGG CTCCCGCTCT
GGTGGCTTCT CTGGTGACCT TGAGCGTCAG CACGCCTTCG AGCTGCCGGT GATGGGCATG
GAAATGCTGT TCCTGTTTAT GCTGTTTACC GCGCTGTATT TCAAAGGTGG CGCGGCGGCA
GCGGCGCTGG CATCGATCTC TGGCGGACTG TGGGCAGCTG TATTCTGGAT TGGGGTAGTG
GCTATCGGCT TTGGGGTGCC ACTGATGATG CGCCTCAGTG GTAAACACGG CCGCAGCGCC
ATGGTCACAG CGGCCTGCGC GAGCCTGATT GGGGTGCTGG CACTGCGGCA TTTTATCCTT
TACGCCGGTC AATCTTATCT GTCTTGA
 
Protein sequence
MNNIWGDMSQ YDGITWHWVI AVYLFMAGLS AGSLLMGIGL RWYRGQTQGS SQSRAESAVL 
KAAALIAPIA ICLGMLCLVF DLTKPFHFWL ILINYNLSSV MSIGVIALLA YIPLTFVYAL
VVLKDELPKC GLGFLGGLAD SLGKLRGMLE GALFVLSLVV GAYTGFLISA MNAYPMLNTA
VLPALFLVSG LSAGAAANSL LAVTMFGGDK HSPQASGSRS GGFSGDLERQ HAFELPVMGM
EMLFLFMLFT ALYFKGGAAA AALASISGGL WAAVFWIGVV AIGFGVPLMM RLSGKHGRSA
MVTAACASLI GVLALRHFIL YAGQSYLS