Gene Sama_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3173 
Symbol 
ID4605420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3761445 
End bp3762182 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content55% 
IMG OID639782589 
Producthypothetical protein 
Protein accessionYP_929045 
Protein GI119776305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCCG ACCTCATCAC CCTGGGCCTT GCCCTGCTGA TTATTTTCAG CGGTGCCCTG 
ATTCAAAGCC TGATTGGCTT TGGTCTTGCC GTGGTGGCCA GCCCGCTCTT GTATCTGGTT
GAACCCGAAC TGGTGCCCGT GCCCGTTATT CTGATGGGCT TCTCCATCGC CCTGCTCACT
TTGCTCAGAG AGCGCAGCGC CCTGGAGTTT GCCGGTCTTC AGTATGCCCT GCTTGGACGC
ATTCCGGGGG GTATTCTGGG TGCAAGTCTG CTGCTCATGG CACCTCAATC CATATTGGGG
CTCGCCATAG CCGTGATTGT GGCGCTGGCC ATGATGCTGA GCCTGATGAA AATCAGCGCG
CCCATTAATC GCCTGACCCT GTTTATCGCT GGCACTGTGT CCGGTATCTT TGGCACCATA
GCCGCCATTG GCGGCCCACC AATGGCGATT CTGCTGGCCG GTAAAGACCC CAATAAATTC
CGCGCGGCCC TGTCGGCATT TTTTATTTTC AGCTCATTGA TAGCCTTGAG TATCCTGGCC
TTTGCCGGTT TGGTAACTGT GTCGCAGCTC CAATGGTCAG TCATCCTGTT GCCCGCGGTA
TTTTGCGGTT ATTGGGTAGC AGGTCGCCTC CTTGGGCGGG TCGATAAGCA AAAAACCAGA
GTCGCGACTC TGGTTCTTTG CTCAATCAGT GCTTTGGTGC TGGCGGCCAA GTCACTGGTG
GTTTTGCTGG CAAGTTAA
 
Protein sequence
MFPDLITLGL ALLIIFSGAL IQSLIGFGLA VVASPLLYLV EPELVPVPVI LMGFSIALLT 
LLRERSALEF AGLQYALLGR IPGGILGASL LLMAPQSILG LAIAVIVALA MMLSLMKISA
PINRLTLFIA GTVSGIFGTI AAIGGPPMAI LLAGKDPNKF RAALSAFFIF SSLIALSILA
FAGLVTVSQL QWSVILLPAV FCGYWVAGRL LGRVDKQKTR VATLVLCSIS ALVLAAKSLV
VLLAS