| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3171 |
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| Symbol | |
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| ID | 4605418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3759691 |
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| End bp | 3760851 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782587 |
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| Product | cystathionine gamma-synthase |
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| Protein accession | YP_929043 |
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| Protein GI | 119776303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGC GCAAAGCAGC CACCATCGCG GTGCGTCAGG GCATAGAGAG CGATACCCAG
CATGGTGCCG TGGTTCCTCC CATTTATCTG TCGACCAATT ACTCCTTCGA TGGCCACAAG
AATCCGCGCA AATTTGACTA TAGCCGCTCG GGTAACCCGA CCCGCTGTAT TCTGGGCGAG
GCGTTGGCCG AGCTGGAGCA GGGTGCGACC GGCATTATTA CATGCACAGG TATGGCTGCC
ATCACGTTGG TGACCAGCCT GCTGGGACCG GACGATCTTC TGGTAGTACC CCACGATTGT
TATGGCGGCA GCTATCGTCT CTTTACCAAC CTCGCCAAAA AAGGTGCCTT TAAGCTGGCT
GTGGTCGACC AGACAGATGA TGCAGCGCTG GCGGCGGTAA TTGCCCAAAA GCCACGCATG
GTGTGGCTTG AAACCCCATC CAACCCGCTG CTGCGGGTAG TGGACATTCA GGCCATCTCT
GACGCCAGTC ATGAAGTTGG CGCTCTGGTG GTAGTGGACA ACACCTTCCT GTCGCCCATC
TTGCAGCAGC CACTGCTTTT GGGGGCCGAC ATAGTGATCC ACTCCACCAC CAAATACATT
AACGGTCACA GCGATGTGGT CGGCGGCGCC GTGATTGCCA GGGATGCCGA GCTCGGTGAA
ACCCTGCACT GGTGGTCCAA TACTCTGGGA CTGACCGGCA GCGCCTTTGA CAGCTATCTT
ACCCTTCGTG GTATCCGTAC CCTGGCTGTG CGGGTACGTG AGCATCAATC CAATGCGCAG
CGCATAGTGG ACGTGCTGAA GAACAGCCCC CAGGTGAGCA AGGTGTATTA CCCCGGTCTT
GCAGACCACC CAGGCCATGA CATAGCCGCA CGGCAACAAA AAGGCTTTGG CGCTATGCTG
AGTTTTGAAC TGGTGGGCGG TGAAAAAGAA CTGGTGGCTT TCCTCGACGC ATTACAGCAC
TTCAGTGTGG CCGAAAGCCT GGGAGGTGTT GAGTCGCTGG TTGCCGTGCC CGCTACCATG
ACCCACAGAG CCATGGTGCC AGAAGCCCGC GCCGAGGCCG GAATTAAAGA CACCCTGCTG
CGACTGTCGG TGGGGATTGA AGATGCAGAA GATTTAGTGG CCGATATCCA AGCCGGCCTG
GCTGCCGTGG CAGCCTGTTG A
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| Protein sequence | MTQRKAATIA VRQGIESDTQ HGAVVPPIYL STNYSFDGHK NPRKFDYSRS GNPTRCILGE
ALAELEQGAT GIITCTGMAA ITLVTSLLGP DDLLVVPHDC YGGSYRLFTN LAKKGAFKLA
VVDQTDDAAL AAVIAQKPRM VWLETPSNPL LRVVDIQAIS DASHEVGALV VVDNTFLSPI
LQQPLLLGAD IVIHSTTKYI NGHSDVVGGA VIARDAELGE TLHWWSNTLG LTGSAFDSYL
TLRGIRTLAV RVREHQSNAQ RIVDVLKNSP QVSKVYYPGL ADHPGHDIAA RQQKGFGAML
SFELVGGEKE LVAFLDALQH FSVAESLGGV ESLVAVPATM THRAMVPEAR AEAGIKDTLL
RLSVGIEDAE DLVADIQAGL AAVAAC
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