Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3170 |
Symbol | metL |
ID | 4605417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3757284 |
End bp | 3759677 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639782586 |
Product | bifunctional aspartate kinase II/homoserine dehydrogenase II |
Protein accession | YP_929042 |
Protein GI | 119776302 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGTT GTCATTTGCA TAAGTTTGGT GGCTCCAGTT TGGCGGATGC CGATTGCTAC CGCCGCGTGG CCCATATCCT GTTGACCCAG GGCCACAGCG ACGATCTGGT GGTGGTATCA GCCGCCGGTA AAACCACCAA CTTTTTGTAT AAGCTGCTTT CGCTGCGTGA TGCCGGTGAG TTGTGGCAGG AAGAGTTACA GGTACTGATT AGCTATCAGC AAAACCTGAT TGAACAGTTA CTCAGTGCCG AGCAGGCTCG CTATCTGCGT GAGCGTCTGT CGACCGACAA GGCTCAGCTG GTCAGTCTCC TGTCATTGGC GACTCTGAAC GATTATCAGA CCAGCCATGT GGTGAGCTTT GGTGAGCGTT GGTCCGCCAG GTTGATGGCG GCACTCTTGC GTGAATCCGG CGTGGCGGCA AGCCACGTGG ATGCCTGCAG CATACTGGTG GCAGATGAAG GCGCCGTGCC CAATATTCGC GAGCAGGAGT CCCGCGAAAA AGTAGCTGCC ATGCTGGCCG AACATGAAAA CGAACGCATT GTTATCACGG GCTTTATCTG CGCCAATCCG GCCGGTGAAA CCCTGTTGCT TGGGCGTAAC GGCTCTGACT TTTCCGCGAC CCTGATAGCC AGTCTGGCAG ATATCGAACG GGTCACCATC TGGACTGATG TGGAAGGGGT GTTCAACGCC GACCCGAATA AGATAAACGA TGCCAAGCTG CTCAAGAGCA TGTCACTGGC GGAGGCCGAC CGCCTGGCGC GTTTGGGTTC TCCTGTGTTA CACAGCCGCA CTTTGCAGCC CCTGTTCAAC ACCCAGGTGA GCATGGCAGT GCGCTCAAGC TACGCGCCTC ATACCGATTT TACTCTGGTT GCTCCAACCA GCTCTCAGGC CAGTGCCCCG GTTGTCACCA ATCTGAGCGA AGTGGCGCTC TTTAGCCTCA CCACCCAGGC AGACACCGAT GCCCTGTTGG CAACATTGTC TGCCTCTGGC TTAACGCCGT TGGCAAGCTG GCAGGGTTCC AGGGGTGGGC TGGAACTGGC CTATACTCCG GAAAATCTTA AGCAGGTCAG CGCCTTTTTA AAGGCGAACG CCGAGGCATA TGGTCTGGGC GATGTTTCCA TCAGCAACGA TTTTGGTTTG GTGGCACTGG TGAGCGCCGA TGCGGTACTG TACCGCAAGA GTTTTGCCCG CCTGCTCAGT CGCGAGGCCA AGCCTTTGTA TCATGATACC CTGAGCCTGG TGACTCTGGT GCCAAAGGCG CAGGTGAACC TGCTTACGCA AAAGGTGCAC CGCCGCTGCG CCGGGCCACG CAAGCGTATT GGCGTCATTC TCCTTGGTGT TGGCAACATC GGCGAAGCCT GGGTAAGCCT GTTTCGCCGG GCCCAAAGCA GTCTGTGCCG TGAGCTGGAG GCGCGGATTG AACTCGTGGG GCTGGTCAGC TCTTCCCGCG CCTACATCAA CAATGCCGGT GTGCACCTGG AGAACTGGAA AACCGAATTT GAGGAGTACG CCACCGACTG GCAGTACGGG CAGTTGTTCG AAGCCTTATC GACACTGAAT TGCGATGAGC TGGTTGCGCT GGACATCAGT GCCAGTGCCA GCCTGACCTT GCAGTACCCG GAGTTTTTTG CCCGTGGTAT TCATGTGGTG AGCGCAAATA AGCTGGCCGG TTCTGGTCCC TTGCCCTTTT ATCGCGATCT CAAGCAGCAG TTGGGTAACC GTCGTCTCTA TTGGCGCTAC AACGCCAGCT GCGGTGCCGG TTTGCCGGTG CAGCATGCGC TTAACGATTT GCACAACAGT GGCGACAGCG TAGAAGCCGT GGGCGGGATA TTTTCCGGTA CTCTCTGTTG GCTTTTTGAA CACTATGACG GTCAGCGTCC TTTCTCTGAT TTGGTCATTG AGGCCCGCGG CCTGGGTATC ACTGAGCCGG ACCCGAGGGA CGATCTTTCC GGTCGTGATA TGCAGCGCAA GCTGCTCATC CTTGCGCGGG AAATTGGCCT GGATCTGGAG CTGGATGATA TTCAGGTCGA GTCTCCTGTA CCGCCGCATC TGGCGGAGCT GACGCTGGAT GAGTTTCTTG CCCGCATTGA TGAACTCGAT GCCCCCATGG CGGATGCCTT GGCGGCTGCC GCAGCCGAGG GCAAGGTGCT GCGTTATATC GCTGCGCTGG ACAGAGCCGG TGGTCAGTTA ATGGCACGGG TAGGGTTGCA GTGGGTCGAC AAAGCCCACC CTTATGCCAA TCTCACCCCG GGCGACAATG TGTTTGTCAT TCGCAGTACC TTTTACCAGG GTAATCCTTT GATTATCAGG GGGCCCGGTG CCGGTCGTGA GGTAACAGCC GCGGCTGTTC AGTCAGATCT GGTGCAGATC TGTCGGGATC TCTTGCAGGA TTGA
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Protein sequence | MARCHLHKFG GSSLADADCY RRVAHILLTQ GHSDDLVVVS AAGKTTNFLY KLLSLRDAGE LWQEELQVLI SYQQNLIEQL LSAEQARYLR ERLSTDKAQL VSLLSLATLN DYQTSHVVSF GERWSARLMA ALLRESGVAA SHVDACSILV ADEGAVPNIR EQESREKVAA MLAEHENERI VITGFICANP AGETLLLGRN GSDFSATLIA SLADIERVTI WTDVEGVFNA DPNKINDAKL LKSMSLAEAD RLARLGSPVL HSRTLQPLFN TQVSMAVRSS YAPHTDFTLV APTSSQASAP VVTNLSEVAL FSLTTQADTD ALLATLSASG LTPLASWQGS RGGLELAYTP ENLKQVSAFL KANAEAYGLG DVSISNDFGL VALVSADAVL YRKSFARLLS REAKPLYHDT LSLVTLVPKA QVNLLTQKVH RRCAGPRKRI GVILLGVGNI GEAWVSLFRR AQSSLCRELE ARIELVGLVS SSRAYINNAG VHLENWKTEF EEYATDWQYG QLFEALSTLN CDELVALDIS ASASLTLQYP EFFARGIHVV SANKLAGSGP LPFYRDLKQQ LGNRRLYWRY NASCGAGLPV QHALNDLHNS GDSVEAVGGI FSGTLCWLFE HYDGQRPFSD LVIEARGLGI TEPDPRDDLS GRDMQRKLLI LAREIGLDLE LDDIQVESPV PPHLAELTLD EFLARIDELD APMADALAAA AAEGKVLRYI AALDRAGGQL MARVGLQWVD KAHPYANLTP GDNVFVIRST FYQGNPLIIR GPGAGREVTA AAVQSDLVQI CRDLLQD
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