Gene Sama_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3154 
Symbol 
ID4605401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3742073 
End bp3742597 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content50% 
IMG OID639782570 
Producthypothetical protein 
Protein accessionYP_929026 
Protein GI119776286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCC CGATGATTCT GTTAGCCGGC ATCTTTGTTG CGGGTTCAGC GATGGCGGAT 
GAAGCAGCCA CTGTGGATCC ACAAACCGAA AACGGCGCTG TAAAAATCAC CTGGCAAGAG
CCCAAAAAAT TCCGCGACAT TAAGTCCAGT GGTGAACTTC AGTCCAGATT CGAAAACCGT
ATGTTTGAGA CCCTGACCAA GGAGCTGAAC AAGCAAGCGT CGAAGTCGCT CAAGCCCGAA
CAGAAGCTGG AACTGGTTGT AACAGATGTG GATATGGCCG GTGATATGCG CCCTACCTTT
GGCGCTACCA GCAATGATTT ACGTGTGGTG AAAGAAATCT ACCCGCCACG CATCAGCTTC
AGTTATCAAG TACTGGAGGG GGAGCAGGTG GTGATTGCCG GTGATGAAAA ACTGACTAAC
CTGAACTTTA TGAACGACAT TCGCCCAGTG AATGACAGAC CCTTTTCCCA TGAAATCCGC
CTGTTAACCG AGTGGTTTGA CAAGCAGGTT GCCCCCAAGC TCTAA
 
Protein sequence
MKFPMILLAG IFVAGSAMAD EAATVDPQTE NGAVKITWQE PKKFRDIKSS GELQSRFENR 
MFETLTKELN KQASKSLKPE QKLELVVTDV DMAGDMRPTF GATSNDLRVV KEIYPPRISF
SYQVLEGEQV VIAGDEKLTN LNFMNDIRPV NDRPFSHEIR LLTEWFDKQV APKL