Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3151 |
Symbol | |
ID | 4605398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3738985 |
End bp | 3739896 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639782567 |
Product | hypothetical protein |
Protein accession | YP_929023 |
Protein GI | 119776283 |
COG category | [S] Function unknown |
COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGCAA CAAGTTTAAG GACAGGGTTC ATTGGCGCAG CGGCACTCTG GATGCTGTCG GCGATGGCGC CACTATTGGC GAAAGAATCA GATAAACCCC CTTTCTATGA ATTCTCCTAT CAGGGCAAAA CCGTCTATCT GCTCGGCTCC ATTCATGTGG GCCGTCCGGA TTTTTACCCC ATGCCAAAGG TAGTGGAAAG TGCATTTGAC AGTGCTGAGG CACTGGTCGT CGAGGCAGAC ATAGGCGCCG CCGGGACAGA TATTCAGCGA CTCTTGATGA CCTATGGTGT GGATGCATCT ACTCCCGATG CGCAGTCCGC TGCCGTGGTG GAGACATACT GCAGCAGCCG TAAACCAGTC TGCGAAGCCA TGGCGCCGCT TTCTCCCTGG ATTCAGGCGT CGCAAATTAC TGTGTTGCGG TTTGCCGAGT TGGGTTATCA GGCTGAATTG GGGGTCGATC AGCACTTCCT GGGCCGTGCC CGGAACAGCA AAGCGATATT TGAGCTGGAG GGCATGGAAT ATCAGTTCAA GCTGATGGCG TCGCTGGACA AGTCGCAGCA GTGGGCCATG GTGCGGGAGG CCATTTCTGC CCCTGGCGAA GATGCTGACG CCCTGGTCGA TAGTTGGCGT GGCGGTAACA GTGATGAGCT GGCTGCGTTG ATGCACGACT CCATGGCAGA AGGTGATGAT ACCCAATTGC TGAAAGCGCT TCTGTGGGAC AGAAACCATG GAATGGCCGA TACGCTGCAG AGTCTCCTGA CCCGGCCGGA GACCCCATCA AGTCTGATGG TTGTGGTGGG TGCGGGCCAT CTTGTGGGTG AGCAGAGTTT GGTGTCTATT CTGGCCCAGC GTGGCATCAG GGTGAAGGGG CATTTGGGCC ACTGTGCCGC TACCCAGGGC ATCTGCCAGT AA
|
Protein sequence | MKATSLRTGF IGAAALWMLS AMAPLLAKES DKPPFYEFSY QGKTVYLLGS IHVGRPDFYP MPKVVESAFD SAEALVVEAD IGAAGTDIQR LLMTYGVDAS TPDAQSAAVV ETYCSSRKPV CEAMAPLSPW IQASQITVLR FAELGYQAEL GVDQHFLGRA RNSKAIFELE GMEYQFKLMA SLDKSQQWAM VREAISAPGE DADALVDSWR GGNSDELAAL MHDSMAEGDD TQLLKALLWD RNHGMADTLQ SLLTRPETPS SLMVVVGAGH LVGEQSLVSI LAQRGIRVKG HLGHCAATQG ICQ
|
| |