Gene Sama_3151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3151 
Symbol 
ID4605398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3738985 
End bp3739896 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content56% 
IMG OID639782567 
Producthypothetical protein 
Protein accessionYP_929023 
Protein GI119776283 
COG category[S] Function unknown 
COG ID[COG3735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAA CAAGTTTAAG GACAGGGTTC ATTGGCGCAG CGGCACTCTG GATGCTGTCG 
GCGATGGCGC CACTATTGGC GAAAGAATCA GATAAACCCC CTTTCTATGA ATTCTCCTAT
CAGGGCAAAA CCGTCTATCT GCTCGGCTCC ATTCATGTGG GCCGTCCGGA TTTTTACCCC
ATGCCAAAGG TAGTGGAAAG TGCATTTGAC AGTGCTGAGG CACTGGTCGT CGAGGCAGAC
ATAGGCGCCG CCGGGACAGA TATTCAGCGA CTCTTGATGA CCTATGGTGT GGATGCATCT
ACTCCCGATG CGCAGTCCGC TGCCGTGGTG GAGACATACT GCAGCAGCCG TAAACCAGTC
TGCGAAGCCA TGGCGCCGCT TTCTCCCTGG ATTCAGGCGT CGCAAATTAC TGTGTTGCGG
TTTGCCGAGT TGGGTTATCA GGCTGAATTG GGGGTCGATC AGCACTTCCT GGGCCGTGCC
CGGAACAGCA AAGCGATATT TGAGCTGGAG GGCATGGAAT ATCAGTTCAA GCTGATGGCG
TCGCTGGACA AGTCGCAGCA GTGGGCCATG GTGCGGGAGG CCATTTCTGC CCCTGGCGAA
GATGCTGACG CCCTGGTCGA TAGTTGGCGT GGCGGTAACA GTGATGAGCT GGCTGCGTTG
ATGCACGACT CCATGGCAGA AGGTGATGAT ACCCAATTGC TGAAAGCGCT TCTGTGGGAC
AGAAACCATG GAATGGCCGA TACGCTGCAG AGTCTCCTGA CCCGGCCGGA GACCCCATCA
AGTCTGATGG TTGTGGTGGG TGCGGGCCAT CTTGTGGGTG AGCAGAGTTT GGTGTCTATT
CTGGCCCAGC GTGGCATCAG GGTGAAGGGG CATTTGGGCC ACTGTGCCGC TACCCAGGGC
ATCTGCCAGT AA
 
Protein sequence
MKATSLRTGF IGAAALWMLS AMAPLLAKES DKPPFYEFSY QGKTVYLLGS IHVGRPDFYP 
MPKVVESAFD SAEALVVEAD IGAAGTDIQR LLMTYGVDAS TPDAQSAAVV ETYCSSRKPV
CEAMAPLSPW IQASQITVLR FAELGYQAEL GVDQHFLGRA RNSKAIFELE GMEYQFKLMA
SLDKSQQWAM VREAISAPGE DADALVDSWR GGNSDELAAL MHDSMAEGDD TQLLKALLWD
RNHGMADTLQ SLLTRPETPS SLMVVVGAGH LVGEQSLVSI LAQRGIRVKG HLGHCAATQG
ICQ