Gene Sama_3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3143 
Symbol 
ID4605390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3730736 
End bp3731029 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content57% 
IMG OID639782559 
Producthypothetical protein 
Protein accessionYP_929015 
Protein GI119776275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.720095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAATTTC CAAGGCGCAA AATTCATCGA CTTATCGCTG TATGGCTTTC TGCCGTACTG 
GTGCTTTTGT CGTTTATTGC TGCCGCCCAC GCCACGACCC ACCTCGATGA AGGAGGGTAC
AATCACTGTA CCCTCTGCTT CCATCAGCAT CAGCTGAACA AGCTCCTGCC CGGGGTGAAC
CTGCCCAAGG TGCCCCTGCT ACAGGTGTTC GAGCAACCCC AGACTCCGCT GTTTACTTCA
GTGGAGTCGG TCCGTCCACA GCCCCAGGCC CGTGGTCCAC CACTCGCTCC TTAA
 
Protein sequence
MQFPRRKIHR LIAVWLSAVL VLLSFIAAAH ATTHLDEGGY NHCTLCFHQH QLNKLLPGVN 
LPKVPLLQVF EQPQTPLFTS VESVRPQPQA RGPPLAP