| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3136 |
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| Symbol | |
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| ID | 4605383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3724392 |
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| End bp | 3725399 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782552 |
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| Product | CheC, inhibitor of MCP methylation |
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| Protein accession | YP_929008 |
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| Protein GI | 119776268 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.823332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTTC CAGTATTGAT ATGTGACGAC TCCGCCATGG CTCGAAAGCA GATGGCGCGC
ACCCTGCCAA AGGATTGGGA TGTGGACATT ACCTTTGCCA CCAATGGTGC AGAAGGCCTG
GAGGCCATCC GGGCCGGCAA GGGCGAGGTG GTGTTTCTTG ACCTCAATAT GCCGGTGATG
GATGGCTATG AGGTATTGCA AACCATTCAG CAACAGGACT TACCCGCACT GGTCATAGTG
GTGTCGGGTG ACATTCAAAT TAAAGCGCAC GAACGGGTTA AAGCCTTGGG TGCACTCGAT
TTTATCCAAA AGCCCGTCAG CGCCGAGGCC ATAGCCGGCA TCCTCCAGGA ATACGGTATT
CTGGTGCCCG GCGAGGGCGA GGGCGACGAA GCCGAAGACA ACCCCCTGTT AAAAGTCGAC
ATGCGCGATG CCTGCCAGGA AATCGCCAAC GTCGCCATGG GCCGGGCGGC AGATCTACTG
GCCAAGCTGC TTGATGTGTT TGTGGTTTTG CCCATTCCCA ACGTCAATGT GCTGGAAGTG
AGCGAGCTAA CCATGGCGCT TAAGGCCACA GAAACTTCTG CCAAGGTTAC CGCACTGTGC
CAAGGCTTTA TCGGTGCAGG GGTGGCTGGA GAGGCGCTGC TGCTATTCCA TGATTCCAGT
TTTCAGGACA TGGCCAAGCT GATGAAACTC GATGGTCCCG GCGATGAGGC CACCGAAGTG
GAAGTGTTGA TAGACACAGG CAATGTGCTT ATCGGCGCCT TTTTGAATGG CATCGCCGAG
CAACTGGACA TGCATTTCAG TCAGGCACAT CCGGTGGTGC TGGGCCGTCA TTGCACGGTC
AACGACTTAA TCCACGACAA TGCCGAGAAA TGGCACCGCA CCCTGGCGAT GGAAATCAAC
TACCGTATCG AAGATCACAA CATTGAGTGC GATCTTCTGC TTCTTTTTAC CGAAGACTCG
CTGCCGACCC TGAACTACAA GCTCGGCTAT ATGTTGGATA CCGATTGA
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| Protein sequence | MALPVLICDD SAMARKQMAR TLPKDWDVDI TFATNGAEGL EAIRAGKGEV VFLDLNMPVM
DGYEVLQTIQ QQDLPALVIV VSGDIQIKAH ERVKALGALD FIQKPVSAEA IAGILQEYGI
LVPGEGEGDE AEDNPLLKVD MRDACQEIAN VAMGRAADLL AKLLDVFVVL PIPNVNVLEV
SELTMALKAT ETSAKVTALC QGFIGAGVAG EALLLFHDSS FQDMAKLMKL DGPGDEATEV
EVLIDTGNVL IGAFLNGIAE QLDMHFSQAH PVVLGRHCTV NDLIHDNAEK WHRTLAMEIN
YRIEDHNIEC DLLLLFTEDS LPTLNYKLGY MLDTD
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