Gene Sama_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3133 
Symbol 
ID4605380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3721789 
End bp3722700 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content60% 
IMG OID639782549 
Producthypothetical protein 
Protein accessionYP_929005 
Protein GI119776265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTTATC ATCAACAGAA ACATAGCCTG AAACACGGAA ATTCCATGCG CGCCTTCTTC 
TCCTTCAGCC TCAGTTTTCT GCTGAGCCTG AGTCTGCTGT GGCCCACAAC CCAGGCCGCC
GAAGACCCGG CATACGATTA CCTCAAGAGC CGCCAGATGC GCGCCATCAC GGTGGAAGAC
GCCGAGCTGC CGGTGTTGGT TCGCCCCTGG GAAGGTAAAA ATCAGCATGG CGCTGCGCTG
ATATTTGCCG ATACCGGTTT TGGCGCCGAT GCCCCGGGAC TGGTGGCCTT TTTGCGGGAT
GGTTTAAGCC CACTCGGTTG GGCCAGTATC AGTATGACGC CCCCCAGTAA CCCACCCCAC
CCGAGTTTTG CCACCGCCCC CGAAGAAGTG GCCAAGGCTG GCGACAAGCA GCTCTCATTG
CCTCCCGGCA AGGCCATGGA CAAATTCAGC CAAGAGGAAT GGCAACAGCA TGTGGATACC
CAACTGGGCT TTGTGGAAGC AAGCCTTGGA CAGCTTGATC AAATAGGCGC GGCGTATCCC
GGTAAACGTA TCCTGGTGAG CATGGATCGC AGCGCGGCCC TGTTGCTGCA GCTGCTGGCC
GATGGCAAGG TGGCGCCACC GGATCTGTTG GTGATCATCA ACCCCTACAG CGAATCCCCC
GACTTTGACG AACGCCTTCC GGGGCTGGTG GCCATGCAGG AAGTGCCTGT GCTGGATATT
CAGTCGCCGG ATGGCAACAG AGCAAGCCTC TCGACCGCCT CACTGCGCCG AGCCAACTCG
GCCATGAAAG ATGCCATGGC CTATCGTCAA TTGCCCTTGG CACTCAATAT CAGCGAGCCC
GATGCCTGGG CCGATGTGCT CAGCGCCATC CGTGGCTTTG CCGCCAGCGT CAAGGCCGCG
CCCGGTAACT GA
 
Protein sequence
MGYHQQKHSL KHGNSMRAFF SFSLSFLLSL SLLWPTTQAA EDPAYDYLKS RQMRAITVED 
AELPVLVRPW EGKNQHGAAL IFADTGFGAD APGLVAFLRD GLSPLGWASI SMTPPSNPPH
PSFATAPEEV AKAGDKQLSL PPGKAMDKFS QEEWQQHVDT QLGFVEASLG QLDQIGAAYP
GKRILVSMDR SAALLLQLLA DGKVAPPDLL VIINPYSESP DFDERLPGLV AMQEVPVLDI
QSPDGNRASL STASLRRANS AMKDAMAYRQ LPLALNISEP DAWADVLSAI RGFAASVKAA
PGN