| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3124 |
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| Symbol | groEL |
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| ID | 4605371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3704504 |
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| End bp | 3706141 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782540 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_928996 |
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| Protein GI | 119776256 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.549796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCTA AAGAAGTAGT ATTTGGTAAC GACGCCCGCG TAAAAATGCT GGCCGGTGTA
AACATTCTGG CCAACGCCGT TAAAGTCACC CTGGGCCCCA AAGGCCGTAA CGTGGTTCTG
GAAAAGAGCT TCGGCGCGCC GCTCATCACC AAAGACGGTG TCTCTGTAGC CAAAGAAATC
GAACTGGAAG ACAAGTTCGA GAACATGGGC GCCCAGATGG TGAAGGAAGT GGCTTCCAAG
GCCAACGACG CTGCCGGTGA TGGCACCACC ACCGCCACCG TACTGGCTCA GGCCATTGTT
AACGAAGGTC TGAAAGCCGT TGCCGCTGGC ATGAACCCAA TGGATCTGAA GCGCGGTATC
GACAAAGCCG TTGCCGCCGC TGTGGTTGAA CTCAAAGCCC TGTCTCAGGA ATGTGCCGAC
TCCAAGGCCA TTGCTCAGGT AGGTACCATC TCTGCCAACT CAGACGAGTC CATCGGTGAC
ATCATTGCCA CCGCCATGGA AAAAGTAGGC AAAGAAGGCG TTATCACCGT TGAAGAAGGC
CAGGCGCTGG AAAACGAACT GGACGTAGTA GAAGGTATGC AGTTCGACCG CGGCTACCTG
TCTCCTTACT TCATCAACAA GCCAGAAACC GGCGCTGTTG AACTGGACAA CCCATTCGTA
CTGCTGGTTG ACAAGAAGAT CTCCAACATC CGCGAACTGC TGCCTATCCT CGAAGGTCTG
GCCAAGACCG GCAAGCCACT GCTGATCGTT GCCGAAGACG TGGAAGGCGA AGCCCTGGCG
ACTCTGGTAG TGAACAACAT GCGCGGTATC GTGAAGGTTG CTGCCGTTAA AGCCCCAGGC
TTTGGTGACC GTCGCAAGGC CATGCTGCAG GATATCGCCA TCCTCACCGG TGGTACTGTT
ATCGCTGAAG AAATCGGTCT GGAGCTGGAA AAAGCCACTC TGGAAGATCT GGGTACTGCC
AAGCGCGTAG TGATCACCAA AGACAACACC ACCATCATCG ATGGCAACGG TGCTGAAGAG
CAGATCAAGG CTCGCGTAGG TCAGATCAAA CAGCAAATCG AAGAAACCAC TTCCGATTAC
GACCGTGAAA AACTGCAGGA GCGTATGGCC AAGCTGGCCG GCGGTGTTGC CGTTATCAAG
GTTGGCGCTG CCACCGAAGT GGAAATGAAA GAGAAGAAAG CCCGCGTTGA AGACGCCCTG
CACGCCACCC GCGCCGCCGT TGAAGAAGGC GTGGTTCCAG GCGGCGGTGT AGCCCTGGTA
CGTGTTGCTT CCAAGATTGC CAACGTAGAC GTTGCCAACG AAGATCAGAA GCACGGTGTA
GTTATCGCTC TGCGCGCCAT GGAAGCCCCA CTGCGCCAAA TCGCCACCAA CGCCGGTGAA
GAAGCCTCTG TAGTGGCCAA CACTGTGAAG AACGGCTCTG GTAACTTCGG TTACAACGCC
GGTAACGACA GCTACGGCGA CATGCTGGAA ATGGGTATCC TGGATCCAAC CAAGGTAACC
CGCTCTGCAC TGCAGTTCGC CGCCTCTGTA GCAGGTCTGA TGATCACCAC CGAAGCCATG
GTAGCCGAGC TGCCGAAGGC TGATGCCCCT GATATGGGTG GTATGGGTGG TGGTATGGGC
GGCATGGGCA TGATGTAA
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| Protein sequence | MAAKEVVFGN DARVKMLAGV NILANAVKVT LGPKGRNVVL EKSFGAPLIT KDGVSVAKEI
ELEDKFENMG AQMVKEVASK ANDAAGDGTT TATVLAQAIV NEGLKAVAAG MNPMDLKRGI
DKAVAAAVVE LKALSQECAD SKAIAQVGTI SANSDESIGD IIATAMEKVG KEGVITVEEG
QALENELDVV EGMQFDRGYL SPYFINKPET GAVELDNPFV LLVDKKISNI RELLPILEGL
AKTGKPLLIV AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DIAILTGGTV
IAEEIGLELE KATLEDLGTA KRVVITKDNT TIIDGNGAEE QIKARVGQIK QQIEETTSDY
DREKLQERMA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVPGGGVALV
RVASKIANVD VANEDQKHGV VIALRAMEAP LRQIATNAGE EASVVANTVK NGSGNFGYNA
GNDSYGDMLE MGILDPTKVT RSALQFAASV AGLMITTEAM VAELPKADAP DMGGMGGGMG
GMGMM
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