| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3112 |
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| Symbol | |
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| ID | 4605359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3687752 |
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| End bp | 3689314 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782528 |
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| Product | hypothetical protein |
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| Protein accession | YP_928984 |
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| Protein GI | 119776244 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0751652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC CATTGCGGAC CTTTGCGTCC CTGTACAGCA CCACCCTCTT GACTGTGCTG
GCCGGGGGCC TGTTGACCAC CTATCTGGGC CTGAAACTGT CGGCCATGCA GGTGCCCCAG
ATTTGGATTG GTGCCATGAT GTCGGCCTAC TACGCCGGTC TGGTGGCGGG CTCCAAGATT
GGCCACCGGC TTATTGCCCG GGTGGGCCAT ATCCGCGCCT TTGTAGCCAG TGCCGGTATA
GTCACCGCCT CCGCCCTTGG GCATGCCCTG GTCGACGACC TCTCGATTTG GATAGTGCTG
CGCCTCTTGG TGGGACTTGG CATGATGTGT CAGTACATGG TGCTGGAAAG CTGGCTCAAC
GAGCAGGCCG ACAACAGCCA GCGCGGCACT GTCTTCGCAA GTTATATGAT TGTCTCTTAT
TTGGCGCTGA TTTTGGGTCA GGGTGCCATC AGCCTCTATC CGGATTTGGG GCTGGAGCCA
CTCCTGCTAA TCGCCATCTG TTTTGCCCTG TGCATAGTAC CCATTGCCCT CACCCGCCGC
ATTCACCCGG CGCCCCTGGT ACCCGCGCCC CTTAACGTGA CTCATTTTTT CAAAAAGGCG
CCACAGGCAC TCACCACGGT CGCCATTGGC AGCATGATAG TGGGCTCCTT TTACGGCTTG
GCGCCCGCCT ATGCCAGTAA TCTGGGGTTG GATCCGCAGC AAGTGGCGAG CTTTATGACA
GCCACCATAG CCGCTGGCCT GCTGGCCCAG TGGCCCATGG GCAAGCTGTC GGACCGGATG
TCCCGCAGCC GATTGATTCG AACCAACTGC CTGCTGCTTG GGGTGCTCAC CCTGGGCATC
GCCATCACCC CTTACCAGCC CACGGTGGCG CTGGTGATGA CCTTCCTGTT CGGCATACTC
GGTTTTACCC TGTACCCGCT GGCCACGGCA CTGGCCAACT CGCGGGTGGA GCAAAGCGAG
CGGGTGGGGC TGTCTGCCAC TATTTTGCTT ACCTTCGGCC TTGGCGCCTG TATCGGCCCC
CTGATTGCCT CGACCCTAAT GCAGTGGCTG GGCAACAGCA TGCTCTACGG CTTTATGTCG
GCCTGCACCC TGGTACTCTT TGCCGGGCTT AACTACATCA ATGCCCGTCA GAAAGCGGAA
GAGCCCTCCA CCAATGACTA CATCATGGCC ACCGGCGACC TGGTATCGTC ACCTCTGGCC
GCCGCCCTCG ACCCCCGTGT GGATATCGAA TCAGTTCAGG AGCAGATGAC CCCAACTGCC
GGTGACGACA TTGCCGATGC CAATGCCTAC ATAGATGAGG ATGACTATGT CGATGAGGGT
GACAGCGCAG ATAACGACAT CAGCGACAAT GATGAGCCAA CCGGCGATAT AGACAACGCC
ACCGACCAGC CCGACGCCTT TATCAACGAA CAGGACTTTA TCGCCGAACC CGAGCCTGCG
ATGGTTCAGG AGAAAGCACC TCCAGCGAAT AGAGGGACGT CAACCGAAAC TGAGCCAGAG
GAGGTCCAGC CGGACGATTC AGCCGAATCG AACTGGACTG CTGGCCCGAA GAGTAAAAGC
TGA
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| Protein sequence | MTNPLRTFAS LYSTTLLTVL AGGLLTTYLG LKLSAMQVPQ IWIGAMMSAY YAGLVAGSKI
GHRLIARVGH IRAFVASAGI VTASALGHAL VDDLSIWIVL RLLVGLGMMC QYMVLESWLN
EQADNSQRGT VFASYMIVSY LALILGQGAI SLYPDLGLEP LLLIAICFAL CIVPIALTRR
IHPAPLVPAP LNVTHFFKKA PQALTTVAIG SMIVGSFYGL APAYASNLGL DPQQVASFMT
ATIAAGLLAQ WPMGKLSDRM SRSRLIRTNC LLLGVLTLGI AITPYQPTVA LVMTFLFGIL
GFTLYPLATA LANSRVEQSE RVGLSATILL TFGLGACIGP LIASTLMQWL GNSMLYGFMS
ACTLVLFAGL NYINARQKAE EPSTNDYIMA TGDLVSSPLA AALDPRVDIE SVQEQMTPTA
GDDIADANAY IDEDDYVDEG DSADNDISDN DEPTGDIDNA TDQPDAFINE QDFIAEPEPA
MVQEKAPPAN RGTSTETEPE EVQPDDSAES NWTAGPKSKS
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