Gene Sama_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3091 
Symbol 
ID4605338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3665749 
End bp3666600 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content53% 
IMG OID639782507 
Producthypothetical protein 
Protein accessionYP_928963 
Protein GI119776223 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.279163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.147365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG TTATAGTCTC CGGGCGCTCT GGCTCCGGAA AGTCGGTAGC CCTCAGGGTA 
CTGGAAGACT TGGGCTACTA CTGCGTCGAT AATTTGCCAT TACAGCTGAT TGGGCCCTTG
CTTGCCCAGC TTAAGGGTAA TAACGACAAG GTCGCCATCA GCATCGATAT CCGCAATATG
CCGGAGCAGG AAAAGGCCCT CGAAAAAGAG CTGGCAAGGC TCCCCGAAGG CGTCGAACTC
ACCAGCTTTT TCCTCAATTC CAGCGACAAG GTGCTGCTCA AACGCTACAG TGAAACCCGC
CGTTTGCACC CCCTGTCCCG CAGCAAGGTC TCATTGCAGG AAGCTATCAA GCTCGAAGGC
AAAATGCTGG CGCCCATTTC CAATATGGTC GACCACTTCA TCGATACCTC CAATCTGAAT
GTCTATGAAC TGGCTGATGC TGTCAGGCAG ATACTACTTG GTCGCACAGA CAAAGAGCTG
GTGATCATCT TCGAATCCTT TGGTTTCAAG CACGGCATGC CCACAGAAGC AGACTTCATG
TTTGATGCCC GCTTCTTGCC CAATCCCCAT TGGGAACCCG AGCTGAGGCC CCTCACTGGC
CTCGATGAGC CGGTTAAGCT GTTTTTGGAA CGTCAGGTGC TGGTCAACAA GTACATCTGG
CAAATCGAAA ACCTGCTGGA AACCTGGTTG CCCCACCTGG AGCGTAACAA TCGCAGCTAC
CTCACCATTG CCATTGGCTG CACCGGTGGT CAACACCGTT CTGTGTATAT TGCCGAGCAG
CTTGCCAAGC GCTTCGCCAA CTCTCACCAC AAGGTTGAGG CCCGCCATCG GGAACTGAAT
GCCAAAGCTT GA
 
Protein sequence
MKLVIVSGRS GSGKSVALRV LEDLGYYCVD NLPLQLIGPL LAQLKGNNDK VAISIDIRNM 
PEQEKALEKE LARLPEGVEL TSFFLNSSDK VLLKRYSETR RLHPLSRSKV SLQEAIKLEG
KMLAPISNMV DHFIDTSNLN VYELADAVRQ ILLGRTDKEL VIIFESFGFK HGMPTEADFM
FDARFLPNPH WEPELRPLTG LDEPVKLFLE RQVLVNKYIW QIENLLETWL PHLERNNRSY
LTIAIGCTGG QHRSVYIAEQ LAKRFANSHH KVEARHRELN AKA