Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3091 |
Symbol | |
ID | 4605338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3665749 |
End bp | 3666600 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639782507 |
Product | hypothetical protein |
Protein accession | YP_928963 |
Protein GI | 119776223 |
COG category | [R] General function prediction only |
COG ID | [COG1660] Predicted P-loop-containing kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.279163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.147365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCG TTATAGTCTC CGGGCGCTCT GGCTCCGGAA AGTCGGTAGC CCTCAGGGTA CTGGAAGACT TGGGCTACTA CTGCGTCGAT AATTTGCCAT TACAGCTGAT TGGGCCCTTG CTTGCCCAGC TTAAGGGTAA TAACGACAAG GTCGCCATCA GCATCGATAT CCGCAATATG CCGGAGCAGG AAAAGGCCCT CGAAAAAGAG CTGGCAAGGC TCCCCGAAGG CGTCGAACTC ACCAGCTTTT TCCTCAATTC CAGCGACAAG GTGCTGCTCA AACGCTACAG TGAAACCCGC CGTTTGCACC CCCTGTCCCG CAGCAAGGTC TCATTGCAGG AAGCTATCAA GCTCGAAGGC AAAATGCTGG CGCCCATTTC CAATATGGTC GACCACTTCA TCGATACCTC CAATCTGAAT GTCTATGAAC TGGCTGATGC TGTCAGGCAG ATACTACTTG GTCGCACAGA CAAAGAGCTG GTGATCATCT TCGAATCCTT TGGTTTCAAG CACGGCATGC CCACAGAAGC AGACTTCATG TTTGATGCCC GCTTCTTGCC CAATCCCCAT TGGGAACCCG AGCTGAGGCC CCTCACTGGC CTCGATGAGC CGGTTAAGCT GTTTTTGGAA CGTCAGGTGC TGGTCAACAA GTACATCTGG CAAATCGAAA ACCTGCTGGA AACCTGGTTG CCCCACCTGG AGCGTAACAA TCGCAGCTAC CTCACCATTG CCATTGGCTG CACCGGTGGT CAACACCGTT CTGTGTATAT TGCCGAGCAG CTTGCCAAGC GCTTCGCCAA CTCTCACCAC AAGGTTGAGG CCCGCCATCG GGAACTGAAT GCCAAAGCTT GA
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Protein sequence | MKLVIVSGRS GSGKSVALRV LEDLGYYCVD NLPLQLIGPL LAQLKGNNDK VAISIDIRNM PEQEKALEKE LARLPEGVEL TSFFLNSSDK VLLKRYSETR RLHPLSRSKV SLQEAIKLEG KMLAPISNMV DHFIDTSNLN VYELADAVRQ ILLGRTDKEL VIIFESFGFK HGMPTEADFM FDARFLPNPH WEPELRPLTG LDEPVKLFLE RQVLVNKYIW QIENLLETWL PHLERNNRSY LTIAIGCTGG QHRSVYIAEQ LAKRFANSHH KVEARHRELN AKA
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