| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3086 |
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| Symbol | |
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| ID | 4605333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3662113 |
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| End bp | 3662667 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639782502 |
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| Product | OstA-like protein |
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| Protein accession | YP_928958 |
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| Protein GI | 119776218 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.431766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.101166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCTAA ATAAGTCGCT CATTCTGGTG CTGCTTTGCA CCTGCAGCGC TGTGGCTTTG
GCCAACACCA AGTTTGATTT GAGCCAGGAA GTCAAAATTG CCGCAGCCAA CAGTTATGCC
GATCTGAAAA ACAAGCGCAT TGTATACGAA GGCCCGGTGA CCCTGACCCA GGGCAGCCTG
GTGCTTAAGG CGGGTGAACT GAGCTCTTTC ACCGACGAGA AAAGCGGTAA ACGCATTCTG
CTCGCCAAGG GTAACCCTGC CACTTACAGT CAGCAGGTGG AAGATGGCCG CACAGTGCAT
GCCAGTGCTA CGGAAATCAG CTACAACATC GACAGCCGTG TAATGAGCCT CAAAGGCAAC
GCCAAGGTCG AGCAGGATGG CAGCCAGGTG AGCGCCGACT CCATCGTTTA CGATATCGAA
AAGCAGCAGC TCACGTCCCA AAGCAGCGGT AAAAAAGACG ACCGGGTTAT CACCATCATC
AAGCCCGAAA ATTACCAGCA GGATCTGCAG GATAAAGTTA AGACAGAGCA ACCCCAGCAA
GAGAAGCAGC AATGA
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| Protein sequence | MNLNKSLILV LLCTCSAVAL ANTKFDLSQE VKIAAANSYA DLKNKRIVYE GPVTLTQGSL
VLKAGELSSF TDEKSGKRIL LAKGNPATYS QQVEDGRTVH ASATEISYNI DSRVMSLKGN
AKVEQDGSQV SADSIVYDIE KQQLTSQSSG KKDDRVITII KPENYQQDLQ DKVKTEQPQQ
EKQQ
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