| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3083 |
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| Symbol | |
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| ID | 4605330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3660047 |
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| End bp | 3661024 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782499 |
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| Product | arabinose-5-phosphate isomerase |
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| Protein accession | YP_928955 |
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| Protein GI | 119776215 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.353966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGACA GAAAACAACT GCGCCAATGG GGCAGCAAGG TTATCGATAT CGAAAAAGCT
GCACTGGACA ACCTGTACCA GTTTGTCGAC AGTGATGCCT TTGCCGACGC CTGCGAGCTT
ATCCTGCGCT GCACTGGCAA GGTTATCGTG ATGGGTATGG GTAAATCCGG CCACATTGGC
AACAAGATTT CCGCTACTCT GGCAAGCACA GGTACGCCGG CGTTTTTTGT TCATCCGGGG
GAAGCGAGCC ACGGTGATTT GGGCGTGCTC AGTGACAACG ACATAGTGCT GGCCATCTCC
AACTCCGGTG AGTCCAGTGA GATCCTCACC CTGATGCCAG TGATTAAACG CCGTGGTATT
CCTATCATCT CCATGACTGG CAAGCCTGAG TCCACCATGG CCAAGCATTC CCTTTTGCAC
CTGTGTATCA AGGTGCCGGA AGAAGCCTGT CCCCTGGGGC TTGCCCCGAC CTCATCCACC
ACAGCAACCC TGGTGATGGG TGATGCCCTG GCGGTCGCGC TGCTGCAGGC CAAAGGCTTT
ACCAAGGACG ACTTTGCCAT GTCACATCCC GGTGGTGCCC TGGGCCGCAA GTTACTGCTG
CACGTCAGTG ATGTCATGCA TAAAGGAGAC GAGCTGCCAC TGGTACAGGA TGATATCTGC
ATTACCGATG CCCTCTATGA AATCTCCAAG AAAGGCTTGG GAATGACGGC TATTGTGAAC
GCTTCTGGTG CCCTGGAAGG CATCTTTACC GACGGTGACC TGCGCCGGGT GATTGATGCG
CAAATTAACC TGCGTCAAAC CAGTATTGCC GATGTGATGA CCCGCAACTG CATTACCATT
GGTGAGCACA TACTGGCTGC CGAAGCACTT AAACTGATGG ACGAAAAAAA TATCAACGGC
CTGATTGTGA TTGACGCCGA GCGACGCCCA ATCGGCGCGC TCAACATGCT GGATATGGTT
AAAGCAGGGG TGATCTGA
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| Protein sequence | MVDRKQLRQW GSKVIDIEKA ALDNLYQFVD SDAFADACEL ILRCTGKVIV MGMGKSGHIG
NKISATLAST GTPAFFVHPG EASHGDLGVL SDNDIVLAIS NSGESSEILT LMPVIKRRGI
PIISMTGKPE STMAKHSLLH LCIKVPEEAC PLGLAPTSST TATLVMGDAL AVALLQAKGF
TKDDFAMSHP GGALGRKLLL HVSDVMHKGD ELPLVQDDIC ITDALYEISK KGLGMTAIVN
ASGALEGIFT DGDLRRVIDA QINLRQTSIA DVMTRNCITI GEHILAAEAL KLMDEKNING
LIVIDAERRP IGALNMLDMV KAGVI
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