| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3082 |
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| Symbol | |
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| ID | 4605329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3659041 |
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| End bp | 3660003 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782498 |
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| Product | K+-dependent Na+/Ca+ exchanger related-protein |
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| Protein accession | YP_928954 |
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| Protein GI | 119776214 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.389731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTACTCA ACATCTTAAT GCTTGTTGCA GGTCTGGCGG TTTTGGTATG GAGCGCCGAC
AAATTTGTTT ACGGTGCCGC AGCCTTCGCC CGTAATCTGG GCCTGCCCCC TATGCTCATT
GGTCTGACGA TTGTTGCCAT GGGCAGTTCC GCCCCTGAAA TGTTTGTGGC CGCCACTGCG
TCTATGGATG GCATGCGCGA TACCGCCGTG GGCAACGTGC TTGGCTCCAA TGTCGCCAAC
ATCACCCTGA TTTTGGGCTT GACCGCCATG ATAGGCGCCA TCGCCGTCAG CTCTCAAACC
CTCAAGCGGG AAATTCCCAT GATGCTGGCC GCCACGGCGC TGGCAGGTTA TTTTCTCCAT
GATGGCTTCC TCACCCGCAC CGAAGGTTGG GTCCTTATGG GAGCCTTTTT ACTGCTGATG
CTGTATCTCA TCTGGCATGC GCTGACCAAC AAGGACCCGG ACCCGCTGGC CGCTGAAGCC
GATGAAGAGA TCCCAAGAGA TGTGCCTACT TCCAAGGCCC TGATTTGGCT GGTTGTCGGC
ATAATACTTT TGCCGCTCTC TGCCGATTGG ATGGTGGATG GCGCCGTGGG CATCGCCAAA
TACTATGGCC TGTCGGATCT GGTTATTGGT CTCACCATTA TTGCCGTGGG CACCAGTCTG
CCTGAGCTTG CCGCCTGTGT GGCCAGCGCA CTGAAGAAAG AAGATGACCT GGCAATAGGC
AATATTGTCG GCTCCAACAT GTTTAACATC CTGGCTGTTC TCGCTCTGCC CGGCATCATC
GCCCCCGGCG TAGTCGATGC ACAGGCTGTC AGCCGTGACT TTTACATGGT AATGGCCACC
AGCATCGCAC TGGCGCTCTT TGTGCTTTTG AGCGGCAAAG ATCGCGAACT CAAACGCTGG
CACGGCGGTT TATTCCTTGT GGTATTTATC GGTTATCAGT TCGTGCTGTT CCAGGCACAC
TGA
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| Protein sequence | MLLNILMLVA GLAVLVWSAD KFVYGAAAFA RNLGLPPMLI GLTIVAMGSS APEMFVAATA
SMDGMRDTAV GNVLGSNVAN ITLILGLTAM IGAIAVSSQT LKREIPMMLA ATALAGYFLH
DGFLTRTEGW VLMGAFLLLM LYLIWHALTN KDPDPLAAEA DEEIPRDVPT SKALIWLVVG
IILLPLSADW MVDGAVGIAK YYGLSDLVIG LTIIAVGTSL PELAACVASA LKKEDDLAIG
NIVGSNMFNI LAVLALPGII APGVVDAQAV SRDFYMVMAT SIALALFVLL SGKDRELKRW
HGGLFLVVFI GYQFVLFQAH
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