| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3071 |
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| Symbol | rplM |
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| ID | 4605318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3649330 |
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| End bp | 3649758 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639782487 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_928943 |
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| Protein GI | 119776203 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000152627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.192156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACTT TTACTGCCAA GCCAGAAACT GTATCTCGTG ACTGGTACGT TGTTGACGCC
GAAGGTAAGA CTCTGGGTCG CATCGCTACT GAAATTGCTA GCCGTCTGCG CGGTAAGCAC
AAGCCTGAGT ACACTCCTCA CGTTGACACC GGTGACTACA TCATCGTTAT CAATGCTGAG
AAAGTGACTG TGACTGGCAA CAAAGCTGCA GGCAAGATGT ACTACTCTCA CTCTGGTTTC
CCAGGCGGCA TCAAAGAAAT CAACTTTGAA AAGCTGCAGG CTCACAAGCC AGAAATGATC
ATCGAGAAAG CAGTCAAGGG TATGTTGCCA AAAGGCCCGC TGGGTCGTGC TATGTTCCGC
AAGCTGAAAG TATACGCTGG CGCCGAGCAC AACCACGCTG CACAACAACC TCAAGTTCTT
GATATCTAA
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| Protein sequence | MKTFTAKPET VSRDWYVVDA EGKTLGRIAT EIASRLRGKH KPEYTPHVDT GDYIIVINAE
KVTVTGNKAA GKMYYSHSGF PGGIKEINFE KLQAHKPEMI IEKAVKGMLP KGPLGRAMFR
KLKVYAGAEH NHAAQQPQVL DI
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