Gene Sama_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3070 
SymbolrpsI 
ID4605317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3648923 
End bp3649315 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content54% 
IMG OID639782486 
Product30S ribosomal protein S9 
Protein accessionYP_928942 
Protein GI119776202 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000352838 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.198807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTA CTCAGTACTA CGGCACTGGC CGTCGCAAAA CTTCTACCGC TCGCGTATTC 
GCTAAAGTAG GCAGCGGTAA CATCATCGTT AACAAGCGTC CTCTGGATGT TTATTTCGGT
CGTGAGACTG CTCGTATGGT TGTTCGTCAG CCGCTCGAGC TGGTTGAAAT GACTGAAAAG
CTGGACATCT ATGTGACTGT TAAGGGCGGT GGTATCACTG GCCAAGCCGG TGCCATCCGT
CACGGTATCA CCCGCGCTCT GATGGAGCTG GACGAGTCTC TGCGTCCTAC TCTGCGTGCC
GCTGGTTTCG TTACCCGTGA TGCCCGTCAG GTTGAGCGTA AGAAAGTTGG TCTGCGCAAA
GCACGTCGTA GACCACAGTT CTCCAAGCGT TAA
 
Protein sequence
MAATQYYGTG RRKTSTARVF AKVGSGNIIV NKRPLDVYFG RETARMVVRQ PLELVEMTEK 
LDIYVTVKGG GITGQAGAIR HGITRALMEL DESLRPTLRA AGFVTRDARQ VERKKVGLRK
ARRRPQFSKR