| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3062 |
|---|
| Symbol | rpsR |
|---|
| ID | 4605309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 3641322 |
|---|
| End bp | 3641549 |
|---|
| Gene Length | 228 bp |
|---|
| Protein Length | 75 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639782478 |
|---|
| Product | 30S ribosomal protein S18 |
|---|
| Protein accession | YP_928934 |
|---|
| Protein GI | 119776194 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.382795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.211294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTT ATTTCCGTCG TCGCAAGTTC TGCCGTTTCA CCGCTGAAGG TGTTGCAGAG
ATCGATTACA AAGATATTGC TACTCTGAAG AACTACATCA CTGAGAGCGG CAAAATCGTT
CCTAGCCGTA TCACCGGTAC CAGCGCTAAG TACCAGCGCC AACTGGCTCG CGCCATCAAG
CGCGCTCGTT ATCTTTCTCT GCTGCCATAC ACTGATCTGC ATCAGTAA
|
|---|
| Protein sequence | MARYFRRRKF CRFTAEGVAE IDYKDIATLK NYITESGKIV PSRITGTSAK YQRQLARAIK
RARYLSLLPY TDLHQ
|
|---|
| |