Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3059 |
Symbol | |
ID | 4605306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3635277 |
End bp | 3637466 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639782475 |
Product | hypothetical protein |
Protein accession | YP_928931 |
Protein GI | 119776191 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000942986 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.160447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACC TAGTGGCAGC GGCTCTGGTG CTTTCTTCCG GAGTGGCACT CGCCGACGAA GGCCAGTGGC AACCTTATCA AATGCCTTCC ATCGCAGACA AACTCAAAGC CCGCGGTATA GACATCCCAG CAGAGCAGTT GGCCGACTTA AGCCGCTATC CCATGAACGC CGTGGTGGGG CTGGGCTATT GTACCGCCAG TTTTGTATCC CCCCAAGGGC TGGCGGTGAC AAATCATCAC TGCGCATTCA GAGCCATTCA ATATAACAGC AGTAAAGAGA AAAACTATCT TGCCGATGGC TTCCTGGCGA CCAGCATGGA TAAAGAGCCT TCCGCTGGCC CCAACGAGCG CCTGTACGTG ACCGAAGCCG TGACAGATGT CAGCGCGCAA ATCCGTGACG CCCTGCCGGA AGAGCCGCTG GCCCGTGTTG AAGCCATTGA AAATCGTCAA AAAGCGCTCA TCAAAGAGTG TGAGAGTGAC GATAACTACC GCTGCTCGGT CAGAAGCTTC CACAACGGGC TGGAATACTA CCTTATCAAG CAGTTGATGA TCCGCGATGT ACGCCTCGTC TACGCGCCTC CTGAAAGTGT TGGTGGCTAC GGCGGCGATA TCGACAACTA CGAATACCCT CGCCACAGCG GCGATTTCAC CTTCCTGCGT GCCTATGTTG GTAAAGATGG CAAACCGGCA CCTTACGCTG AAGACAACGT GCCATATCAG CCAAAAAGCT TCCTCAAAAT TAACGCCAGC GGCGTGAAGG CCGGTGATGG TGTATTTGCA GCAGGCTATC CAGGCTCAAC CAGCCGCTAC CGTTTGACCA CCGAACTTGA GTTTGCCAGC GACTGGCTCT ACCCCACCCA GGCCAAACGC TTCCAGGCCC GCATCGATAC CATCGAAGCC ATGGGCGCTG CCGACACTGA ATTGGCCATC AAGTACGCAG GTACCGTGGC AGGCATGGCC AACCGCATGA AGAAGCTTAA CGGTCTGCTC GACGGCTTTA AGGCCACCGA CATTGCCGCC ATCAAGCAGC AACGTGAAGA TGCCTTTATG ACCTGGTATG CCAGCCATGG CGATGCCAAG CAGATGGATG AGCTCAAGGC ACTGATTAAA GAAGGCCAAA CTCAGTATCA GACCACCTAC TACTTCAACA ATGCTCAATC GAGCGATCTG CTCACTGCAG CAAACAGCCT GTATCGCCTG GCCAAAGAGA AACAAAAAGC CGATGCCGAC CGTGAGCTGG GCTATCAGGA ACGGGACATG AAGATGTTCG CCGATCGCCT GAAACGTATC GATTCAAGCT TCGACGTTAA AGTCGACAAG GTGCTGTGGC AGGCGGATAT CGAAGAGTAT CTCGGTCAAA ACCAGCGCGT CGATGTGTTG GATAAGATGC TGACAGTTAA AGAAGGACAG GATCTGTCAT CCATGCTGGA TGGACTCTAT GCAGCCACCG GCCTCACCGA CCAGGCCACG CGCCTTGGGT GGATGGACAA AACCCCGGCG GACTTTGAAG CCAGTGACGA TCCTTTTATC AAACTGGCAG TGGCGCTCTA CGACACCCGT ATGGCCCAGG AAAAAGCGGA AAAAACGCTG GATGGTAAGC TCAGTATTGC CCGCCCGGCG ATGATGCAGG CCGTGATTGC CTACAACAAG GATAAAGGCT GGCCAGTATA CCCGGATGCC AACGGCACTC TGCGTATCAC CTACGGTATG GTAGATGGCT ATCAGTCACG TGATGCACTC TACAAGCAGC CCTTCACCCG TCTGGAAGGC ATAGTAGCCA AACACACTGG CGTAGAGCCA TTTAACGCGC CACAAAAGGT GCTGGATGCC ATCAAGCGTG GTGACATGGG CAAACATAAT GTGGATGACC TCTACCCAGA CGCCCGCAGT TTTATGTGTA AGCTGTTCTC TTGCCTGGAT AAACCCGAAG CCTTTAATTC GGTACCGGTC AACTTCCTGT CCAGCGTAGA CACCACGGGC GGCAACTCAG GCTCTCCGGT ATTCAATGGT CGTGGTGAAT TGGTGGGGCT CAACTTTGAT TCCACCTATG AAGCCATCAC CAAAGACTGG TTCTTCAACC CTGAAATCAC CCGTGCAGTC CATGTGGATG TTCGCTATAT CCTGTGGATG ATGGACAAGG TGGATAACGC GCAGAATTTG TTACAGGAAC TCACCCTGGT AACTAATTGA
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Protein sequence | MRNLVAAALV LSSGVALADE GQWQPYQMPS IADKLKARGI DIPAEQLADL SRYPMNAVVG LGYCTASFVS PQGLAVTNHH CAFRAIQYNS SKEKNYLADG FLATSMDKEP SAGPNERLYV TEAVTDVSAQ IRDALPEEPL ARVEAIENRQ KALIKECESD DNYRCSVRSF HNGLEYYLIK QLMIRDVRLV YAPPESVGGY GGDIDNYEYP RHSGDFTFLR AYVGKDGKPA PYAEDNVPYQ PKSFLKINAS GVKAGDGVFA AGYPGSTSRY RLTTELEFAS DWLYPTQAKR FQARIDTIEA MGAADTELAI KYAGTVAGMA NRMKKLNGLL DGFKATDIAA IKQQREDAFM TWYASHGDAK QMDELKALIK EGQTQYQTTY YFNNAQSSDL LTAANSLYRL AKEKQKADAD RELGYQERDM KMFADRLKRI DSSFDVKVDK VLWQADIEEY LGQNQRVDVL DKMLTVKEGQ DLSSMLDGLY AATGLTDQAT RLGWMDKTPA DFEASDDPFI KLAVALYDTR MAQEKAEKTL DGKLSIARPA MMQAVIAYNK DKGWPVYPDA NGTLRITYGM VDGYQSRDAL YKQPFTRLEG IVAKHTGVEP FNAPQKVLDA IKRGDMGKHN VDDLYPDARS FMCKLFSCLD KPEAFNSVPV NFLSSVDTTG GNSGSPVFNG RGELVGLNFD STYEAITKDW FFNPEITRAV HVDVRYILWM MDKVDNAQNL LQELTLVTN
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