| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3057 |
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| Symbol | alr |
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| ID | 4605304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3632624 |
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| End bp | 3633718 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782473 |
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| Product | alanine racemase |
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| Protein accession | YP_928929 |
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| Protein GI | 119776189 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0113499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.425267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACCTT TTCCCCGCGC AGAAATCAGC AGTCGCGCGC TGAAGGCCAA CCTTAAAAGG
CTGCGCCAAA TTGCCCCGGG CAGCAAGGTC ATGGCCGTGG TGAAAGCCAA CGGTTACGGT
CATGGGCTGC TCAATGTGGC CGAGGTGCTA ACCGATGCCC ATTCAAATGC TGACGCAGAT
GGCTTCGGAC TGGCAAGGCT TGAGGAAGCT CTGGAGGTCA GGGCCGGTGG TGTGTCTGCC
AGACTCTTAT TACTGGAAGG CTTTTTCCGC AGTGAAGATT TGCCCCTGTT GGTGGAGCAT
GACATAGATA CGGTCGTTCA CCATGTCTCC CAGCTGGACA TGCTGGAGTC GGTCAGTCTG
TCTAAGCCGG TCACCGTGTG GCTAAAAATT GATTCCGGTA TGCATCGGCT GGGGTTTCAT
GCCAGTGAGT TCAAGGACGT TTACCAGAGG CTTCAGCAAA ACCCCAATGT GGCAAAACCC
GTGCATCTGA TGACCCATTT CAGCTGCGCC GATGAGCCTC AAAAAGACTT TACCGCTACA
CAGATGGCCC ATTTCAACGC TCTGACCCAG GGGTTACCCG GGGACAGAAC CCTGGCAAAC
TCCGCAGGGG TGCTGTACTG GCCACAAAGC CAGGCCGATT GGATTCGTCC GGGTATCGCG
CTTTACGGAG TTTCTCCAGT GGCGGGTGAC CTTGGCAGCA ACCACGGTCT TGAACCTGCG
ATGGAGTTGG TCTCGCAATT GATTGCCGTG CGGGAGCACA GCGCCGGGGA GAGTGTGGGT
TATGGCGCAT ACTGGACGGC CAGTCGTGAT ACTCGCCTCG GTGTTGTGGC CATAGGTTAT
GGTGACGGAT ACCCCCGCAA TGCCCCCGAG GGCACGCCAG TGCTGGTTAA TGGCAGACGG
GTACCCATTG TTGGTCGGGT CTCCATGGAT ATGCTGACGG TGGATCTGGG GCCTGACGCC
GCAGATAAAG TGGGTGACAG GGCACTTCTC TGGGGCAAGG AATTGCCCGT GGAAGAAGTG
GCTGAACGAA TTGGCACCAT TGCCTATGAG CTGGTGACCA AGTTAACCCC GCGAGTGGCA
GTTTGCCTCG ATTAA
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| Protein sequence | MKPFPRAEIS SRALKANLKR LRQIAPGSKV MAVVKANGYG HGLLNVAEVL TDAHSNADAD
GFGLARLEEA LEVRAGGVSA RLLLLEGFFR SEDLPLLVEH DIDTVVHHVS QLDMLESVSL
SKPVTVWLKI DSGMHRLGFH ASEFKDVYQR LQQNPNVAKP VHLMTHFSCA DEPQKDFTAT
QMAHFNALTQ GLPGDRTLAN SAGVLYWPQS QADWIRPGIA LYGVSPVAGD LGSNHGLEPA
MELVSQLIAV REHSAGESVG YGAYWTASRD TRLGVVAIGY GDGYPRNAPE GTPVLVNGRR
VPIVGRVSMD MLTVDLGPDA ADKVGDRALL WGKELPVEEV AERIGTIAYE LVTKLTPRVA
VCLD
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