Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3049 |
Symbol | |
ID | 4605296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3627076 |
End bp | 3627816 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639782465 |
Product | hypothetical protein |
Protein accession | YP_928921 |
Protein GI | 119776181 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00345897 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.661514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA CCATTCTGGC TGCCTCACTG CTTTCAGCGT TGGCTGCGTT TTCGGCCAAC GCGGCCACTG TTGTTGGTTT TAAAGTCGGT GCCGATTACT GGCATGCTGA TGCCAAAGGC AATGTGCCTG ACGATGCTGG TAACCTGCAC GGGTTTGATT ACGACACATC GGGTCAGACA AGTGTTTGGT TTGCCGTTGA GCATCCAGTG CCCTTGCTGC CTAACCTGCT GATCCGTGAA AATCGCCTCG AAGAAGATGG CTTTAACGCC GATGCAACTC TGGCCTTCGG TGGTATTCCT TTCAATGGTG AACTCTATAG CACCATGGAT CTGAGCAATA CCGACTTTGT GCTTTACTAC GAGCTGCTGG ACAACGATAT AGTGTCGCTG GATGTGGGCG GTGCCTACAA AAAGATGAAC GGTTCACTGC GCATCAGCAA TGCCTCGGGC GTTGCTGCGC AAAAGGACTT TACCGATGGC ATTATCATGG GTTACGCCAG TGCCGTGGTG GGTATGCCTG GTCTGGGTCT CTATGGCTTT GCCGACCTGA TGGCGGGGTT GGATGAAAGC CAGGTGTACG ATTACAGTGT GGGTCTGGGC TGGGAGTTTG ACGGTATTGC ACTGGATACC CGTATCCGCG CTGGCTACCG TGAGTTCAGT TTCGATGTGA ATGGCTTCGA TGGCATTAGC ACTGACAGTA GCTTCAAAGG CTATTTTGCC GGTGTGGAAC TGCTTTTCTA A
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Protein sequence | MKKTILAASL LSALAAFSAN AATVVGFKVG ADYWHADAKG NVPDDAGNLH GFDYDTSGQT SVWFAVEHPV PLLPNLLIRE NRLEEDGFNA DATLAFGGIP FNGELYSTMD LSNTDFVLYY ELLDNDIVSL DVGGAYKKMN GSLRISNASG VAAQKDFTDG IIMGYASAVV GMPGLGLYGF ADLMAGLDES QVYDYSVGLG WEFDGIALDT RIRAGYREFS FDVNGFDGIS TDSSFKGYFA GVELLF
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