| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3047 |
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| Symbol | |
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| ID | 4605294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3624867 |
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| End bp | 3625481 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782463 |
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| Product | ADP-ribose diphosphatase |
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| Protein accession | YP_928919 |
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| Protein GI | 119776179 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000114185 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.948189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTAACA GACTCTTCAG TCGTGAAGAC ATTGAAGTAC TGGGCTCGAG CACCCTGTAT
CAGGGTTTTT TCAAGATGGT CAGGTATCAG TTTCGCCATC GTCTGTTTGC CGGCGGCTGG
AGTGAGGTCG TCTCGCGGGA AGTGTTTGAA CGTGGTCACG CTGTTGTGGT GTTGCCCTAT
GATCCGGTGA CTGACCAGGT GGTCCTGATT GAACAGGTCA GGTTTCCGGC ACTGGAAACC
TCTGAATTCC CTTGGTTGCT GGAGTTGGTG GCTGGCATGA TGGAGGACGG GGAGTCGGCC
GAAGACGTGG CACGCAGAGA GTTAATGGAA GAGGCGGGGC TTACTGCATC GCGGATGCTG
CCCATTGGCA GTTATCTCTC CAGTCCCGGG GGCTGCAGCG AGCGCTTTTA TTGTTTTCTG
GCTGAAGTCG ATGCCAGTCA GGCGGAAGGC CTCCATGGCC TTGCCCATGA GCATGAAGAT
ATTCGGGTGC ACGTGATGAG CCGCGAAGCC GCCTATGCCA TGGTGGAAAG TGGCGAAATC
GATAATGGTT CAACTGTGCT TGGTCTGCAG TGGCTTGAGT TAAACCGACA TAAGCTGATG
CGGAGTGACC TTTGA
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| Protein sequence | MFNRLFSRED IEVLGSSTLY QGFFKMVRYQ FRHRLFAGGW SEVVSREVFE RGHAVVVLPY
DPVTDQVVLI EQVRFPALET SEFPWLLELV AGMMEDGESA EDVARRELME EAGLTASRML
PIGSYLSSPG GCSERFYCFL AEVDASQAEG LHGLAHEHED IRVHVMSREA AYAMVESGEI
DNGSTVLGLQ WLELNRHKLM RSDL
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