| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3043 |
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| Symbol | |
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| ID | 4605290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3621035 |
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| End bp | 3622921 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782459 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_928915 |
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| Protein GI | 119776175 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC TATACAATTC TGATGCCATT GAGGTGCTGA ACGGCCTTGA GCCGGTAAAG
CGCCGTCCCG GTATGTACAC CGATACCACA CGTCCCAATC ACCTGGGACA GGAAGTCATA
GACAACAGTG TGGACGAGGC GCTGGCGGGA CACGCAAGTC GTATTGATGT TATTCTGCAA
ACGGACAATT CCCTCGAGGT CATCGACGAC GGTCGGGGTA TGCCGGTGGA TATCCACCCG
GAAGAGGGCA TTCCCGGGGT TGAACTCATT CTCACCAAAC TCCACGCCGG TGGTAAATTT
TCCAATAAAA ACTACCAGTT TTCCGGTGGT TTACACGGTG TGGGCATTTC GGTAGTAAAC
GCCCTGTCGC GCCGGGTTGA AATCACAGTG CGTCGGGATG CTCAGGTCTA CGACATGGCC
TTCGAGCACG GTGATAAGGT GGAAAGCCTG ACCGTGACCG GTACCTGCGG CCGGCGTAAT
ACGGGTACCC GTGTGCATTT CTGGCCGGAG CCAAGCTATT TCGATTCACC CAATTTCTCC
ATTACCAAGC TGATCCATCT GCTTAAAGCC AAGGCAGTAC TCTGCCCCGG GCTCAGAATC
AAATTTACCA ACAAGCAAAC CGGTGAAGTG CATGAATGGT ACTTCGAGGC CGGGCTGACG
GATTACTTAA AGAGTGCCGT GGGCGATGCC CCCATGCTGC CTCAAGAGCC CTTTGTGGGC
AGTTTTGCCG GTAATAATGA GGCTGCAGAC TGGGCTATTA CCTGGTTACC CGAGGGCGGC
GAATATCTTG CCGAAAGTTA TGTAAACCTG ATCCCCACCC CGCTGGGTGG CACCCACGTG
AATGGCTTCC GTCAGGGGCT GCTGGAATCC ATGCGGGAGT TTTGTGAGTT TCGAAACCTC
ATTCCCCGCG GAATAAAACT CAGTCCTGAA GATATCTGGG ATAAAACGGC GTTCATTTTA
TCCATCAAGA TGCAGGATCC CCAGTTTGCC GGTCAGACCA AGGAAAAACT CTCCAGCCGT
CAGAGCGCGG CCTTTGTGTC CGGCATCGTT CGCGACGCGT TTTCCCTGTA CCTGAACTCC
CATACGGATT TGGCGGAAAT GCTGGCGGAG ATGTGTATCT CCAACGCCCA GAAGCGTATG
AAGGCGGCCA AGAAAGTCGC CCGTAAAAAG GTCACGGCAG GGCCAGCCTT GCCCGGCAAG
CTAACCGACT GCAGTGGTCA GGACCCCATG ACCTCAGAAC TCTTTTTGGT GGAAGGGGAT
TCGGCAGGTG GCAGTGCCAA ACAGGCACGG GATCGCGAGT TTCAGGCCAT CATGCCGCTG
CGGGGCAAGA TTTTGAATAC CTGGGAGGTT GAGGCTTCAC AGGTATTGGC ATCTCAGGAA
GTACACGATA TCTCCGTGGC CATCGGCTGC GACCCTGACA GCGATGATAT TTCTGAGCTG
CGTTACGGTA AGGTGTGTAT TCTGGCCGAC GCCGACTCGG ATGGATTGCA CATTGCTACC
TTGTTGTGTG CACTCTTCCT CAAGCACTAC CGGGTACTCG TGGAGCGTGG CCATGTGTAC
ATCGCCATGC CGCCGCTGTT CCGTATCGAT ATAGGTAAAG AGGTATACTA CGCCCTCGAT
GAGTCGGAAA AGCAGGGGAT CCTCGACAGG ATCGCCGCCG AAGGCAAAAA AGGCAAACCT
CAGGTAACGC GCTTTAAAGG ACTGGGTGAA ATGAACCCGT TACAGCTGCG TGAGACCACC
ATGGACCCTA ACACCCGTCG CCTGGTGCAG CTGACCATAG ACGACAGTGA CGATACCGTC
GCGCTGATGG ACATGTTGCT GGCGAAAAAG CGCTCCGGCG ACAGAAAAAC TTGGCTTGAA
ACCAAAGGCG ATCTGGCAAT CATCTGA
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| Protein sequence | MTNLYNSDAI EVLNGLEPVK RRPGMYTDTT RPNHLGQEVI DNSVDEALAG HASRIDVILQ
TDNSLEVIDD GRGMPVDIHP EEGIPGVELI LTKLHAGGKF SNKNYQFSGG LHGVGISVVN
ALSRRVEITV RRDAQVYDMA FEHGDKVESL TVTGTCGRRN TGTRVHFWPE PSYFDSPNFS
ITKLIHLLKA KAVLCPGLRI KFTNKQTGEV HEWYFEAGLT DYLKSAVGDA PMLPQEPFVG
SFAGNNEAAD WAITWLPEGG EYLAESYVNL IPTPLGGTHV NGFRQGLLES MREFCEFRNL
IPRGIKLSPE DIWDKTAFIL SIKMQDPQFA GQTKEKLSSR QSAAFVSGIV RDAFSLYLNS
HTDLAEMLAE MCISNAQKRM KAAKKVARKK VTAGPALPGK LTDCSGQDPM TSELFLVEGD
SAGGSAKQAR DREFQAIMPL RGKILNTWEV EASQVLASQE VHDISVAIGC DPDSDDISEL
RYGKVCILAD ADSDGLHIAT LLCALFLKHY RVLVERGHVY IAMPPLFRID IGKEVYYALD
ESEKQGILDR IAAEGKKGKP QVTRFKGLGE MNPLQLRETT MDPNTRRLVQ LTIDDSDDTV
ALMDMLLAKK RSGDRKTWLE TKGDLAII
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