| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3042 |
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| Symbol | |
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| ID | 4605289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3619860 |
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| End bp | 3621035 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782458 |
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| Product | L-sorbosone dehydrogenase, putative |
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| Protein accession | YP_928914 |
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| Protein GI | 119776174 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCTG CCCATGATAA CGATAACAGG CTAAAGAGAA TGTTGAGTAA TACACACCTC
GGCCGCATGC TGATTGCCTG CCTCGCCTGT ATAGCGACGC AGACCCAGGC CGAGCAAACG
ATGACAATTA CCGTCACCAA GGGCTTTGGT ATCACCCAAT ATGCCTCGGA GCTTGAGGAT
GCCAAGCAGC TTGCCGTCGG TGATAATGGC ACCCTGTTTG TGGGCTCCGG CAAAGGCGGC
ACCATCACGG CCCTGGTCGA CAGCAACAAC GACGGGCGAG TGGATCGCCG CTATGTTGTG
GGTAAAGGCC TGGATAATCC TGAGGCCATC GCTTTTCACA AGGGTCATCT TTATGTGGCG
TTGGATGAAA AAATCCTGCG TTATGAAGAA ATTGAGCAGC GCCTTCGCCG CCCTGGCCGC
CCCAAAGAGA TTTACTCCAA ACTCCCCGGC GATACCAAAA AGAGTGCCCG CTATATGGCG
TTTGGTCCCG ATGGCAGACT TTATATCGCC ATAGGCTCAC CCTGTAACGT GTGTGAGTCT
GAATCACCGT TTGGCTCTGT TATTGCCATC GATGTGGATA CCGGTGCCAG TGAGCAGATA
GCGACCGGGG TACGAACCGT GCGCGGTATG GACTGGGATC CGCAAGATGG CAAGCTGTGG
TTTGCCGATA TAGGCCGCGA CTGGATGGGT GACAACCTGC CTCCGGATGA AATAAACCGA
ATCGATATCA AGGGTATGCA CTATGGGTTT CCCTATGTGC ATGCCAGCGA TGTGATTGAG
CCTGCCTACG AAAAGCCTGA AAACCTCAAG GTTGTGAGCC CGGTTTATGA GCTGCCAGCT
CACGTGTCTC CCATGGGGAT GCTGTTTTAT CGCGGCGAGC AATTCCCGGC GGAATATCAT
AACCAGTTGC TGGTGGCAGA AAACGGCTCC TGGAACCGCT CGAGCAAAAT TGGCTACCAG
ATAGTCGTCC TGACCCTGGA TAAGGGCGAA GTAAAGCGCC GCGAGACACT GATAAGCTTT
CTGGATGGTG AGTTTCCGGT TGCCCGCCCC TATGGCATGG CATTGGGCGC CGACGGTTCA
CTGTTTATCT CAGACGATTT GAAAGGCAAC GTTTACCGGT TCTTCTACAG GCATGAAGCC
GAAGAAGAGG CGCCAACGCA GGAAGAGCAA CCATGA
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| Protein sequence | MLPAHDNDNR LKRMLSNTHL GRMLIACLAC IATQTQAEQT MTITVTKGFG ITQYASELED
AKQLAVGDNG TLFVGSGKGG TITALVDSNN DGRVDRRYVV GKGLDNPEAI AFHKGHLYVA
LDEKILRYEE IEQRLRRPGR PKEIYSKLPG DTKKSARYMA FGPDGRLYIA IGSPCNVCES
ESPFGSVIAI DVDTGASEQI ATGVRTVRGM DWDPQDGKLW FADIGRDWMG DNLPPDEINR
IDIKGMHYGF PYVHASDVIE PAYEKPENLK VVSPVYELPA HVSPMGMLFY RGEQFPAEYH
NQLLVAENGS WNRSSKIGYQ IVVLTLDKGE VKRRETLISF LDGEFPVARP YGMALGADGS
LFISDDLKGN VYRFFYRHEA EEEAPTQEEQ P
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