| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3041 |
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| Symbol | |
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| ID | 4605288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3617593 |
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| End bp | 3619863 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782457 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_928913 |
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| Protein GI | 119776173 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG CCATTGACTT AAGCCTGGAT GGTGTGGAGC AAATGCCCTT GAGGCGCTTC
ACCGAAGAGG CCTATCTCAA CTATTCCATG TACGTAATCA TGGACCGGGC CCTTCCCCAT
ATTGGTGATG GCCTCAAACC GGTGCAAAGA CGTATCGTCT ATGCCATGAG TGAACTGGGC
CTTAATGCCC AGTCGAAGCA CAAGAAATCT GCCCGTACGG TGGGTGACGT GCTGGGTAAA
TATCACCCCC ACGGTGACAG TGCCTGTTAC GAAGCCATGG TGCTGATGGC GCAGCCGTTT
TCCTACCGCT ATCCGCTGGT GGATGGTCAG GGTAACTGGG GTGCTCCTGA CGATCCTAAG
TCCTTCGCGG CCATGCGATA TACAGAAGCG CGGCTGTCGC GCTTCTCTGA GGTACTGCTC
TCTGAGCTCG GCCAGGGCAC TGTGGATTGG GGCGTCAACT TTGACGGCAC CATGAAAGAG
CCCAAGGTGT TGCCGGCCCG CTTGCCCCAC ATTCTGCTTA ACGGGGTAAC CGGTATTGCT
GTGGGTATGG CGACGGATAT ACCGCCCCAC AACGCCCGGG AACTGACGCG AGCCTGTATC
GAGTTAATTG ATAATCCCGC CACTGAGCTT AAGCGCTTGA TGGAGCTCGT ACCGGGTCCT
GATTATCCCA CAGAGGCGGA AATCATTACC CCCGCCGATG AAATCGCCAA GATTTATGAG
TCCGGCCGTG GCTCCATCAG GATGCGCGCT GTTTACGAGA TGGAAAACGG TGAGGTGGTG
ATTTCTGCGC TGCCGCATCA GGCCAGCTCC AGTAAGATCC TCGAGCAAAT TGCGGCTCAG
ATGCAGGCGA AAAAGCTGCC GATGGTGACG GATTTGCGCG ACGAATCCGA CCACGAAAAT
CCGGTGCGAC TGGTGTTGGT ACCACGTTCT AATCGGGTGG ATGTGGAACA GCTGATGGCC
CACCTGTTTG CGACCACCGA GCTTGAAAAG AGCTACCGGG TTAACCTGAA TGTGATTGGC
CTGGATGGCC GTCCCAAGGT AAAAGGCCTG AAGGACATGC TGGCCGAGTG GCTGGTTTTC
CGTACCGAAA CTGTACGTCG CCGTCTGCAA TTCCGTCTGG ACAAGGTGCT GGCAAGGCTG
CACATCCTCG AAGCCCTGAT GATTGCCTTC CTTAACATCG ATGAAGTGAT TGAAATCATT
CGCTTCCACG ATGAGCCCAA GGCTGAGCTG ATGGCGCGTT TCGGGCTGTC GGACCGTCAG
GCCGAGGCCA TTTTGGAACT CAAGTTGCGC CATTTGGCCA AGCTCGAAGA GATGAAAATC
AAAGCCGAGC AAAGCGAGCT TGAAGAAGAG CGCAATAAGC TGGAGCAGAT CCTGGGGTCG
GAGCGTCGTC TCAAGACCCT GATCAAGAAA GAACTGGAAA AGGATGCCGA AACCTACGGT
GACGATCGCC GCTCGCCTCT GGTCGTGCGT GGCGAGTCCC GCGCCCTTAC CGAACAGGAG
TTGCTGCCCA CCGAGCCTGT GACAGTTGTG CTTTCTGAAA AGGGTTGGGT ACGCTGTGCA
AAGGGCCACG ATATAGACGC AGGTGCTCTG TCTTATAAAG CGGGCGATGG CTTCCTGTGT
GCGGCGCAAG GGCGCAGCAA CCAGCAGAGT GTGTTTATCG ACAGCTCTGG CCGAGCCTTC
TCAACCGATA CCCACACCCT GCCGTCGGCG AGAAGTCAGG GCGAGCCCAT TACCACTCGC
TTTAATCTGG CGCCTGGCGA AACCATGGAG CATGTGCTCC TGGGTGAAGA GCAGCACCAC
TACCTGCTCG CCAGTGACGC AGGTTATGGT TTTGTCTGCT CTTTTGCCGA TATGATTTCC
CGTAACAAGG CGGGTAAGGC GCTGCTCAGT TTGCCATCCG GCGCCAAGGC GTTGGCCCCC
CGTCGGGTTG ACAAAGACGC CAATCCCTCC ATTTTGGCCA TCACCAATGA AGGCCGCATG
CTGGTCTTTG GACTGGATGC GCTGCCGCAG CTGGCGAAAG GTAAGGGCAA TAAGATTATC
GGTATCCCCA GTGAACGGGC CAAAAACCGA GAAGAGCTGT TGATACACCT GCACCTGGTG
CCAGCCGACT CGGCCGTGAC CCTGTGGGCT GGCAAACGTA AGCTGACGCT GAAGAGTTCC
GATCTCGAGC ATTACCGGGG TGAGCGTGGC CGACGCGGTG CCAAGCTGCC AAGGGGCCTG
CAGCGGGTTG ACAGTGTCGA GCTGGGGGAA GGGGATACCC CCGCCTTGTA A
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| Protein sequence | MSDAIDLSLD GVEQMPLRRF TEEAYLNYSM YVIMDRALPH IGDGLKPVQR RIVYAMSELG
LNAQSKHKKS ARTVGDVLGK YHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSRFSEVLL SELGQGTVDW GVNFDGTMKE PKVLPARLPH ILLNGVTGIA
VGMATDIPPH NARELTRACI ELIDNPATEL KRLMELVPGP DYPTEAEIIT PADEIAKIYE
SGRGSIRMRA VYEMENGEVV ISALPHQASS SKILEQIAAQ MQAKKLPMVT DLRDESDHEN
PVRLVLVPRS NRVDVEQLMA HLFATTELEK SYRVNLNVIG LDGRPKVKGL KDMLAEWLVF
RTETVRRRLQ FRLDKVLARL HILEALMIAF LNIDEVIEII RFHDEPKAEL MARFGLSDRQ
AEAILELKLR HLAKLEEMKI KAEQSELEEE RNKLEQILGS ERRLKTLIKK ELEKDAETYG
DDRRSPLVVR GESRALTEQE LLPTEPVTVV LSEKGWVRCA KGHDIDAGAL SYKAGDGFLC
AAQGRSNQQS VFIDSSGRAF STDTHTLPSA RSQGEPITTR FNLAPGETME HVLLGEEQHH
YLLASDAGYG FVCSFADMIS RNKAGKALLS LPSGAKALAP RRVDKDANPS ILAITNEGRM
LVFGLDALPQ LAKGKGNKII GIPSERAKNR EELLIHLHLV PADSAVTLWA GKRKLTLKSS
DLEHYRGERG RRGAKLPRGL QRVDSVELGE GDTPAL
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