| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3033 |
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| Symbol | |
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| ID | 4605280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3608786 |
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| End bp | 3609841 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782449 |
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| Product | ribosome-associated GTPase |
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| Protein accession | YP_928905 |
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| Protein GI | 119776165 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.148404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAAAA AGAAACCTCT CAGTCATGGC CAATTGCGCC GTATGCGCGC CAATCATGAA
AAGCGGCTCA GCCGCGGCAA GCTCGACAAC CAAGCACCTG AATTACAGGA TAGTTCACTC
GGTCAGGAAG AACCCGCGGT GGTCATTTCC CGCTTCGGTC AGCATGCCGA TGTGGAGATC
AGCAGTGGTG AAATCATTCG CTGCAACATT CGCAGAACCA TACAAAGCTT GGTTACCGGA
GATAAGGTGA TTATCCGTCA GGCGCTGGAA GATGGCAGCG CCATTGGTGG CGTGGTGGAA
GCCGTGCATC CCCGCACCTC GTCACTGACC CGACCGGATT TGTATGACGG CGTAAAAATC
ATTGCCGCCA ATATCGACCA GATCCTGATT GTTTCCTCCG TTGTGCCAGC CTTTACTACG
CAGATAATTG ACCGATATTT GGTTGCCTCG GAAGACACGG GGATTTCGCC CGTTATCATC
CTCAATAAAA TCGACCTGAT GAATGATGAG GACAGAGCCG ATATCGAAGC CGCGCTCGGC
AGATACCGCT CGCTGGGATA CCCGGTATAC GAAGTCAGCA GTAAATCAAA AGCCGGTATC
GACACGGTAA AAGCATTACT TAACGACAAA ATCAGTGTGT TTGTCGGCCA GTCCGGCGTG
GGTAAGTCTT CCATGATCAA TGCCTTGCTG CCCGATGCAG AACTGCTGAC CGGCGAAGTA
TCCGAAGGCT CGGGCCTTGG CCAACACACC ACCACCACCG CCAGATTGTT GCACTTGCCA
AGCGGTGGCG ATCTGATAGA TTCCCCCGGC GTACGCGAAT TCGCCCTCTG GCATCTTCCC
CCAGACCGAG TCAGCTGGTG CTTCACTGAA TTTCGCGACT ACCTCGGCAC CTGTAAATTC
CGTGATTGTA AACACCTGGA TGATCCGGGC TGCAGTCTTC GCGAAGCACT GGAAGCCGGC
AAAATCCATC AGGACAGATT CAATAATTAT CACAGGATCA TCGCCAGTCT GGATGAACAG
CGTCACGCAC GTCATTTCAG ACACAACGAA GAATGA
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| Protein sequence | MSKKKPLSHG QLRRMRANHE KRLSRGKLDN QAPELQDSSL GQEEPAVVIS RFGQHADVEI
SSGEIIRCNI RRTIQSLVTG DKVIIRQALE DGSAIGGVVE AVHPRTSSLT RPDLYDGVKI
IAANIDQILI VSSVVPAFTT QIIDRYLVAS EDTGISPVII LNKIDLMNDE DRADIEAALG
RYRSLGYPVY EVSSKSKAGI DTVKALLNDK ISVFVGQSGV GKSSMINALL PDAELLTGEV
SEGSGLGQHT TTTARLLHLP SGGDLIDSPG VREFALWHLP PDRVSWCFTE FRDYLGTCKF
RDCKHLDDPG CSLREALEAG KIHQDRFNNY HRIIASLDEQ RHARHFRHNE E
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