Gene Sama_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3027 
SymbolmutL 
ID4605274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3600972 
End bp3602924 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content56% 
IMG OID639782438 
ProductDNA mismatch repair protein 
Protein accessionYP_928899 
Protein GI119776159 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0173835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTC AGGTATTGCC ACCTCAGTTG GCAAACCAGA TTGCGGCTGG TGAGGTGGTA 
GAGCGCCCAG CCTCGGTGAT AAAAGAGCTG GTGGAAAACA GTTTGGATGC GGGCGCTACC
CGGGTCGATA TTGATATCGA TAAGGGCGGC AGCAAGCTTA TCCGTATTCG CGACAATGGT
GGCGGTATTC CGAAAGCGGA ATTGGCGCTG GCACTGGCGC GCCATGCGAC TTCCAAGGTG
CAAACCCTCG AAGATCTTGA AGCGATTCTG AGTTTTGGCT TTCGCGGGGA GGCATTGGCG
AGTATCAGTT CTGTGTCACG ACTGACACTG ACGTCGCGCA CCACAGAGCA AGCAGAAGCC
TGGCAGGCCT ATGCCGAGGG CTCGGAGGTG GCTATCCGGG TGATGCCTGC GGCGCACCCT
GTTGGTACCA CCATTGAGGT GGCCGATCTC TTCTTTAATA CCCCGGCACG GCGGCGATTT
CTCAAGAGTG ACAAAACCGA GTTTACCCAT ATTGATGAAT GGCTGAAGCG TATCGCTCTG
ATACGCTCTG ACGTGCATTT TTCCCTGAGC CACAATGGAA AGCCTGTGCG CCAGTATCGT
TGCGCTGCGA CTGATACTCA GTACTTGCAG AGGCTGGCTC AGGTGGCAGG CAGGGCGTTT
GCCGACAGCG CCATCAAGGT CGACTGTCAG CATGATGGCA TGGGTTTGAG TGGCTATCTA
CAGTCACCAG CGCTCTCTGA CATGGTGGAT TGCCATTACT TTTATGTTAA CGGCCGCCTG
ATCCGCGACC GATTGGTCAA TCACGCGGTA CGTCAGGCCT TCGGTGAGCT CGGGACCTTT
GAACAGCCTG CCTTCGTGCT GAGTCTGACA CTCGATCCCC ATCAGGTGGA TGTCAATGTG
CATCCGGCCA AGCACGAGGT GCGTTTTCAC CAAGCCCGAT ATGTGCATGA CTTTATTTTG
CAGGTGTTGC AATCGGCATT AAGCCAGATG CAGGACTTGC CCTTGGCTGA GGAGCTGCCA
AGGGCTCAAG AGTCCCCTGC GTCGGTGAGA GAACATACGG CAGGATACGC GCCCTATACC
TTTAACCGTG ACGCTGCGAC TGAAGCCGCC GGTGTTCTCA GTAGTTTGCC GGACACTCAA
CGAAGTCAGC GCCAACCCGA GAAGGCTGCA TCTGGGCAGC GCAGTAGCGT TGATGCTGGC
CTTTCTCAAG GTTCATCGGC CCATCGCGCG TCTCAAACCG GATTGGGGCA GTCGGGAAAC
GCTGCCACAT TTGAAACATC TGAACGCCAT GGAAGTGGCT ATTCGGGCGC AGGCCAGGGA
CAGCGTTATG TCCGGGACCA ATTGTCCGGG CAACAGCGTC AGGCGGCCCA GTATTATGCC
GAGCTGTTGC ACACTCCCGA GGTGGTAAGC ACCAGCGGCA GTCTTCAGGC AGGTCTGCCC
ATGCCGCCCT TGCTGGCGGG CCGCTATTGG GTGTTGGCAC AGGATGAGCA TCTTCGCCTG
TTGTCCATTA GCGATGCCGC TAAAGCGCTT GTCGTACAGG AAATATTATC CAAGCTGCCA
ACGGGATTGG TGGGGCAGCC TCTGCTGATG CCGGTCGCGG TTGCCGCCGA TGCGGATTGG
ACGATGATAT TGGCCGAACG GGAGTCGTTG CTCAGGCGTC TTGGTCTTGA ACTGACAATT
CGGTATCAGC AGTTGATAAT CAAAAAAGTG CCCCCATATC TGAGGGACAG TCAGCTGGCA
AAGCTTATCC CTGAGTTTCT GGAATGGATA AAGTTAGAGG TGCCAGCCGA CGAAGCCCTG
TGTCACTGGC TGGCTCAGTA CGTGACAGGT TTTGATGCGG CCCCCAAGGT GTGGCAGCGT
ATTCAGTCCC TTGAAGCGAC TGAGCGGAAT AAGATTTTAG AGAGTGCCAG AGATTTGCCC
TGGCAGACAT GGCTAGATGA ATACAAACAC TGA
 
Protein sequence
MAIQVLPPQL ANQIAAGEVV ERPASVIKEL VENSLDAGAT RVDIDIDKGG SKLIRIRDNG 
GGIPKAELAL ALARHATSKV QTLEDLEAIL SFGFRGEALA SISSVSRLTL TSRTTEQAEA
WQAYAEGSEV AIRVMPAAHP VGTTIEVADL FFNTPARRRF LKSDKTEFTH IDEWLKRIAL
IRSDVHFSLS HNGKPVRQYR CAATDTQYLQ RLAQVAGRAF ADSAIKVDCQ HDGMGLSGYL
QSPALSDMVD CHYFYVNGRL IRDRLVNHAV RQAFGELGTF EQPAFVLSLT LDPHQVDVNV
HPAKHEVRFH QARYVHDFIL QVLQSALSQM QDLPLAEELP RAQESPASVR EHTAGYAPYT
FNRDAATEAA GVLSSLPDTQ RSQRQPEKAA SGQRSSVDAG LSQGSSAHRA SQTGLGQSGN
AATFETSERH GSGYSGAGQG QRYVRDQLSG QQRQAAQYYA ELLHTPEVVS TSGSLQAGLP
MPPLLAGRYW VLAQDEHLRL LSISDAAKAL VVQEILSKLP TGLVGQPLLM PVAVAADADW
TMILAERESL LRRLGLELTI RYQQLIIKKV PPYLRDSQLA KLIPEFLEWI KLEVPADEAL
CHWLAQYVTG FDAAPKVWQR IQSLEATERN KILESARDLP WQTWLDEYKH