Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3027 |
Symbol | mutL |
ID | 4605274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3600972 |
End bp | 3602924 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639782438 |
Product | DNA mismatch repair protein |
Protein accession | YP_928899 |
Protein GI | 119776159 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0173835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTC AGGTATTGCC ACCTCAGTTG GCAAACCAGA TTGCGGCTGG TGAGGTGGTA GAGCGCCCAG CCTCGGTGAT AAAAGAGCTG GTGGAAAACA GTTTGGATGC GGGCGCTACC CGGGTCGATA TTGATATCGA TAAGGGCGGC AGCAAGCTTA TCCGTATTCG CGACAATGGT GGCGGTATTC CGAAAGCGGA ATTGGCGCTG GCACTGGCGC GCCATGCGAC TTCCAAGGTG CAAACCCTCG AAGATCTTGA AGCGATTCTG AGTTTTGGCT TTCGCGGGGA GGCATTGGCG AGTATCAGTT CTGTGTCACG ACTGACACTG ACGTCGCGCA CCACAGAGCA AGCAGAAGCC TGGCAGGCCT ATGCCGAGGG CTCGGAGGTG GCTATCCGGG TGATGCCTGC GGCGCACCCT GTTGGTACCA CCATTGAGGT GGCCGATCTC TTCTTTAATA CCCCGGCACG GCGGCGATTT CTCAAGAGTG ACAAAACCGA GTTTACCCAT ATTGATGAAT GGCTGAAGCG TATCGCTCTG ATACGCTCTG ACGTGCATTT TTCCCTGAGC CACAATGGAA AGCCTGTGCG CCAGTATCGT TGCGCTGCGA CTGATACTCA GTACTTGCAG AGGCTGGCTC AGGTGGCAGG CAGGGCGTTT GCCGACAGCG CCATCAAGGT CGACTGTCAG CATGATGGCA TGGGTTTGAG TGGCTATCTA CAGTCACCAG CGCTCTCTGA CATGGTGGAT TGCCATTACT TTTATGTTAA CGGCCGCCTG ATCCGCGACC GATTGGTCAA TCACGCGGTA CGTCAGGCCT TCGGTGAGCT CGGGACCTTT GAACAGCCTG CCTTCGTGCT GAGTCTGACA CTCGATCCCC ATCAGGTGGA TGTCAATGTG CATCCGGCCA AGCACGAGGT GCGTTTTCAC CAAGCCCGAT ATGTGCATGA CTTTATTTTG CAGGTGTTGC AATCGGCATT AAGCCAGATG CAGGACTTGC CCTTGGCTGA GGAGCTGCCA AGGGCTCAAG AGTCCCCTGC GTCGGTGAGA GAACATACGG CAGGATACGC GCCCTATACC TTTAACCGTG ACGCTGCGAC TGAAGCCGCC GGTGTTCTCA GTAGTTTGCC GGACACTCAA CGAAGTCAGC GCCAACCCGA GAAGGCTGCA TCTGGGCAGC GCAGTAGCGT TGATGCTGGC CTTTCTCAAG GTTCATCGGC CCATCGCGCG TCTCAAACCG GATTGGGGCA GTCGGGAAAC GCTGCCACAT TTGAAACATC TGAACGCCAT GGAAGTGGCT ATTCGGGCGC AGGCCAGGGA CAGCGTTATG TCCGGGACCA ATTGTCCGGG CAACAGCGTC AGGCGGCCCA GTATTATGCC GAGCTGTTGC ACACTCCCGA GGTGGTAAGC ACCAGCGGCA GTCTTCAGGC AGGTCTGCCC ATGCCGCCCT TGCTGGCGGG CCGCTATTGG GTGTTGGCAC AGGATGAGCA TCTTCGCCTG TTGTCCATTA GCGATGCCGC TAAAGCGCTT GTCGTACAGG AAATATTATC CAAGCTGCCA ACGGGATTGG TGGGGCAGCC TCTGCTGATG CCGGTCGCGG TTGCCGCCGA TGCGGATTGG ACGATGATAT TGGCCGAACG GGAGTCGTTG CTCAGGCGTC TTGGTCTTGA ACTGACAATT CGGTATCAGC AGTTGATAAT CAAAAAAGTG CCCCCATATC TGAGGGACAG TCAGCTGGCA AAGCTTATCC CTGAGTTTCT GGAATGGATA AAGTTAGAGG TGCCAGCCGA CGAAGCCCTG TGTCACTGGC TGGCTCAGTA CGTGACAGGT TTTGATGCGG CCCCCAAGGT GTGGCAGCGT ATTCAGTCCC TTGAAGCGAC TGAGCGGAAT AAGATTTTAG AGAGTGCCAG AGATTTGCCC TGGCAGACAT GGCTAGATGA ATACAAACAC TGA
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Protein sequence | MAIQVLPPQL ANQIAAGEVV ERPASVIKEL VENSLDAGAT RVDIDIDKGG SKLIRIRDNG GGIPKAELAL ALARHATSKV QTLEDLEAIL SFGFRGEALA SISSVSRLTL TSRTTEQAEA WQAYAEGSEV AIRVMPAAHP VGTTIEVADL FFNTPARRRF LKSDKTEFTH IDEWLKRIAL IRSDVHFSLS HNGKPVRQYR CAATDTQYLQ RLAQVAGRAF ADSAIKVDCQ HDGMGLSGYL QSPALSDMVD CHYFYVNGRL IRDRLVNHAV RQAFGELGTF EQPAFVLSLT LDPHQVDVNV HPAKHEVRFH QARYVHDFIL QVLQSALSQM QDLPLAEELP RAQESPASVR EHTAGYAPYT FNRDAATEAA GVLSSLPDTQ RSQRQPEKAA SGQRSSVDAG LSQGSSAHRA SQTGLGQSGN AATFETSERH GSGYSGAGQG QRYVRDQLSG QQRQAAQYYA ELLHTPEVVS TSGSLQAGLP MPPLLAGRYW VLAQDEHLRL LSISDAAKAL VVQEILSKLP TGLVGQPLLM PVAVAADADW TMILAERESL LRRLGLELTI RYQQLIIKKV PPYLRDSQLA KLIPEFLEWI KLEVPADEAL CHWLAQYVTG FDAAPKVWQR IQSLEATERN KILESARDLP WQTWLDEYKH
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