| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3026 |
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| Symbol | miaA |
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| ID | 4605273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3600050 |
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| End bp | 3600970 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782437 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_928898 |
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| Protein GI | 119776158 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0249655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCC TGCCCAAGGT GCTGTTTCTA ATGGGGCCAA CGGCTTCAGG CAAGACGGCG
CTGGCGCTGG ACATGGCTGA ACATCACAAC TGTGAGATTA TTTCGGTCGA CTCGGCGCTT
ATCTATCGTG GCATGGATAT AGGGACCGCC AAACCCACAG CTTCGGAGCT GGCGAGGGCG
CCCCACAAGC TGATAGATAT CCTGGACCCG CTCGAGAGTT ACTCGGCGGC AGATTTCAGA
GCCGATGCTG TCAGGGAGAT AGAAGAGACG CTATCCCGTG GTAAAACCCC GCTGCTTGTT
GGGGGGACCA TGATGTATTT CAAGACGTTA CTCGATGGTT TATCACCTTT ACCCAGTGCA
GATGACGCCG TGAGGGCTCA AATTGCTGCC GAGGTTGAGG CGCGGGGATG GCAGGCGCTC
CATGACGAAT TACGCAACAT AGATCCTGTC TCTGCCGAGC GTATTCATCC CAATGATCCC
CAGCGCTTGT CGCGGGCCAT TGAAGTGTAC CGAATAAGTG GCAAGACACT GACAGAGCTG
ACTAAAATTA AAGCCGAGTC TTTGCCTTAC CATATGGTGC AGTTTGCCAT TGCACCGCAA
GACAGAACCG TGCTGCACGG TCTTATCGCA AAGCGATTTC AGCAGATGCT CGCCGAAGGC
TTTATCGGTG AAGTGGAAAC CCTGAAGGCT CGCGGGGATC TGCACCTTGA ACTGCCCTCA
ATGCGCTGCG TAGGTTACAG GCAGGCATGG CAGTATCTGG ATGGTGAATT TGACCATGCT
ACCATGGTCG AAAAAGCTGT GGCCGCCACT AGGCAATTGG CAAAGCGTCA ATTAACATGG
TTGCGGGGAT GGCCTGAGTT ACACTGGTTG GCCAGCGGCG ACGAAGGGAA TTTAGACAAA
CTTGTGCAGC AATCCCGGTA G
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| Protein sequence | MTSLPKVLFL MGPTASGKTA LALDMAEHHN CEIISVDSAL IYRGMDIGTA KPTASELARA
PHKLIDILDP LESYSAADFR ADAVREIEET LSRGKTPLLV GGTMMYFKTL LDGLSPLPSA
DDAVRAQIAA EVEARGWQAL HDELRNIDPV SAERIHPNDP QRLSRAIEVY RISGKTLTEL
TKIKAESLPY HMVQFAIAPQ DRTVLHGLIA KRFQQMLAEG FIGEVETLKA RGDLHLELPS
MRCVGYRQAW QYLDGEFDHA TMVEKAVAAT RQLAKRQLTW LRGWPELHWL ASGDEGNLDK
LVQQSR
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