Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3023 |
Symbol | |
ID | 4605270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3597186 |
End bp | 3598319 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639782434 |
Product | hflK protein |
Protein accession | YP_928895 |
Protein GI | 119776155 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000561401 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTGGA ACGAGCCCGG TAACAAGGGG CAGGACCCTT GGGGAAACAA AGGCGGCAAC GATAAAGGGC CGCCGGATCT GGACGAAGTC TTTCGCAATA TTTCCAAACG TTTTGGCGGC AAGGGCAATG GCCTGGGCTT TGGTGGCCTG GGGTTAATTA TCGCGCTTGG TGCTGCTGTA TGGTTCCTCT CCGGTTTTTA CACCATCAAA ACCGCAGAGC GCGGTGTACA TCTGCGCTTT GGTGAGTACA TTGGTGAAGT TGGTCCCGGT CTGCGCTGGA AAGCCACCTT TATTGATGAA GTGTATCCGG TCGATGTGGA AGCCCGTCGT ACCATCCCGG CTTCTGGCAG CATTCTGACT TCCGATGAGA ACGTGGTGCT GGTCGAGCTG GCTGTGCAGT ACAAGGTGAC TGATGCATAC CAGTACATGT TCAGTGCTGT GGATGCCAAT TCCTCCCTGC GTGAAGCCAC CGACAGCGCA CTGCGTTATG TGGTGGGCCA CTCTAAGATG GATGACATTC TCACCACTGG CCGCGACAAA ATCCGTACCG ATACCTGGGC CGAGCTTGAG CGTATTATTG AGCCTTACAA GCTGGGTCTG ACCATCATGG ACGTTAACTT CCTGCCGGCA CGTCCGCCGG AAGAAGTGAA AGATGCCTTC GATGATGCCA TTGCCGCACA GGAAGATGAG CAGCGCTTTA TCCGTGAAGC TGAAGCTTAT CAGCGTGAAG TTGAGCCCCG TGCCCGTGGT CAGGAACAGC GTATTGCTGA AGATGCCCGC GCCTACAAAG AGCAGGTGGT TCAGCAGGCA CAGGGTGCCG TTGCACGCTT TGAAAAGCTG CTGCCTGAAT ACAAGGCAGC GCCTGAGGTG ACTCGCCAGC GCATGTATAT CGAGGCCATG GAAGAAGTGC TTTCAGGTAA CAACAAGGTG CTTATCGATG CCAAGAACAA CGGTAATCTT CTGTATCTGC CATTGGATAA GATGATCACG CCTTCTGCTG CTGTGCCCAC GTCAGACGAC AGTGGTATCA CGTCAACCAC GCATCTGGAT ACCGGCGCCT TACAGCGCAG TACCGGACTG CCGGTAAGCG GCCGTCCTTC CCGTGAAGAT CGTGTTCGCC AGGGGAGGGA GTAA
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Protein sequence | MAWNEPGNKG QDPWGNKGGN DKGPPDLDEV FRNISKRFGG KGNGLGFGGL GLIIALGAAV WFLSGFYTIK TAERGVHLRF GEYIGEVGPG LRWKATFIDE VYPVDVEARR TIPASGSILT SDENVVLVEL AVQYKVTDAY QYMFSAVDAN SSLREATDSA LRYVVGHSKM DDILTTGRDK IRTDTWAELE RIIEPYKLGL TIMDVNFLPA RPPEEVKDAF DDAIAAQEDE QRFIREAEAY QREVEPRARG QEQRIAEDAR AYKEQVVQQA QGAVARFEKL LPEYKAAPEV TRQRMYIEAM EEVLSGNNKV LIDAKNNGNL LYLPLDKMIT PSAAVPTSDD SGITSTTHLD TGALQRSTGL PVSGRPSRED RVRQGRE
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