| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3021 |
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| Symbol | |
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| ID | 4605268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3595339 |
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| End bp | 3595929 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782432 |
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| Product | ubiquinol--cytochrome-c reductase |
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| Protein accession | YP_928893 |
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| Protein GI | 119776153 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0723] Rieske Fe-S protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000304944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAATG CGCCAGTCGA TTCCGGACGT CGCAGATTCC TGACAGCCGC AACCGCTGTA
GTTGGCGGTG CTGGTGCCGT CGCTGTAGCG GTTCCTTTTA TCAAGTCATG GAATCCGAGC
GCCAAGGCGA AAGCTGCAGG TGCGCCGGTA GAAGTTAATA TCAGCAAGCT GGAACCAGGT
CAGTTGATCC GTGTAGAGTG GCGCGGTAAA CCCGTTTGGG TTGTACGCCG CACCGAGGAA
GTGCTTAAGC AACTTCCCGA GCTCGATGGG CAGCTGCGTG ATCCTGCGTC TGATGAACTA
CAGCAACCCG TGTATGCCCA AAACGGCGTA CGTTCTATCA AGCCAGAGTA CTTTATCGCT
GTTGGTATCT GTACTCACCT GGGCTGTTCT CCTACCTATC TGCCAGATTC ATTTGGCGAG
CAGGTTGAAG GTGTAAGCTC TGGCTTCTTC TGTCCTTGCC ACGGCTCCAA GTTTGACATG
GCCGGCCGCG TATTCCAGGG TGTTCCTGCA CCACTGAACC TGGTGATCCC TCCACACCAG
TATCTTGACG ATGCGAATGT GATCATCGGT GTCGACGGGG AGACTGCATA A
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| Protein sequence | MSNAPVDSGR RRFLTAATAV VGGAGAVAVA VPFIKSWNPS AKAKAAGAPV EVNISKLEPG
QLIRVEWRGK PVWVVRRTEE VLKQLPELDG QLRDPASDEL QQPVYAQNGV RSIKPEYFIA
VGICTHLGCS PTYLPDSFGE QVEGVSSGFF CPCHGSKFDM AGRVFQGVPA PLNLVIPPHQ
YLDDANVIIG VDGETA
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