| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3019 |
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| Symbol | |
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| ID | 4605266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3593427 |
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| End bp | 3594125 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782430 |
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| Product | ubiquinol-cytochrome c reductase cytochrome c1 subunit |
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| Protein accession | YP_928891 |
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| Protein GI | 119776151 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00018062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TACTCATTGC TTTGGTTGCT CTGGTGCCCA CTCTTGGCTT CGCCGCTGGC
GGCCACAACG TGCACCTGGA AAAGGCCAAT ATCGATCTGA ACGATAAAGA GTCTCTGGTT
CGTGGTCTGG ACTTGTTCCA GCACTACTGC TCAGGCTGTC ACAGCACTCA GTATCAGCGC
TATGAGCGTG TTGCCAACGA CCTGGGCGTC TCTATTGATG AGATGCGTAC CAAGTTCGTG
TTCACCGGTG CCAAAGTCGG TGAACTGATG GAAAACGCCA TTCCTGAGAA AGACGCTGCC
AAATGGTTCG GTGCTGCGCC ACCGGATCTG ACGTTGGCCG CCCGTGTGCG TGGCGAAGAC
TGGGTTTACT CTTACCTCAA GGGTTTCTAT AAAGACCCAA GCCGTCCTTT CGGCGTGAAC
AACACTGTAT TCCCTTCTGT GGGTATGCCG CATGTGTTGG AAGGTTTGCA GGGTATCGCG
GTTAAGCAGG CAGACGGCAG TCTGGTTGCC ACCGGCGGTA AGTTGAGTGC TGAAGAGTAC
GATCAGGCTG CCCGTGACAT CACAGGTTTC CTGGTGTACT CAGCAGAACC TATCAAACTG
GAGCGTCAGG CTCTGGGTAT TTGGGTGCTC GGCTTCCTGT TTATCTTCTT TGTTGTGGCC
TACTTCCTGA AGAAAGAATA CTGGAAGGAT GTACACTGA
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| Protein sequence | MKKLLIALVA LVPTLGFAAG GHNVHLEKAN IDLNDKESLV RGLDLFQHYC SGCHSTQYQR
YERVANDLGV SIDEMRTKFV FTGAKVGELM ENAIPEKDAA KWFGAAPPDL TLAARVRGED
WVYSYLKGFY KDPSRPFGVN NTVFPSVGMP HVLEGLQGIA VKQADGSLVA TGGKLSAEEY
DQAARDITGF LVYSAEPIKL ERQALGIWVL GFLFIFFVVA YFLKKEYWKD VH
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