| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3018 |
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| Symbol | sspA |
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| ID | 4605265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3592703 |
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| End bp | 3593332 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782429 |
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| Product | stringent starvation protein A |
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| Protein accession | YP_928890 |
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| Protein GI | 119776150 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0625] Glutathione S-transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00907689 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCTTG CTGCCAACAA ACGCTCTATC ATGACTCTGT TTTCTGGCGC CGACGATCTC
TACAGCCATC AAGTGCGTAT TGTGCTGGCT GAAAAAGGCG TCACCGTTGA TGTTTTACAG
GTCGATCCCA ACGACATGCC AGAGGATTTG CTCGAGCTGA ATCCTTATAA CTCTGTGCCG
ACGCTGGTGG ATCGCGAGCT GGTGTTGTAT GAGTCACGCA TCATCATGGA ATACCTGGAT
GAGCGTTTCC CACACCCACC GCTGATGCCG GTTTATCCGG TTTCCCGCGG CCAAAGCCGT
TTGATGATGC ACCGTATCGA TACCGATTGG TACGTGCTGG TTGATCGCAT CAAGAAAGGT
GACCGTGCCG ATGCCGCCCG TAAAGAGCTC CGTGAAGGCC TGATCGCCAT TTCACCACTG
TTTGGTGAAA TGCCTTACTT TATGAGCGAA GAGTTCGGCC TGGCTGATTG CTACCTCGGC
CCCTTGCTGT GGCGTTTGCC TGCTCTGGGT ATTCACCTGG ACACAGGCGT GGCCAAAGAT
ATCAAGGCGT ACATGACCCG CATCTTCGAT CGCGAGTCGT TCAAGGCGTC ACTGACTGAA
GCCGAGCGCG AAATGCGCAT GGGTATGTAA
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| Protein sequence | MALAANKRSI MTLFSGADDL YSHQVRIVLA EKGVTVDVLQ VDPNDMPEDL LELNPYNSVP
TLVDRELVLY ESRIIMEYLD ERFPHPPLMP VYPVSRGQSR LMMHRIDTDW YVLVDRIKKG
DRADAARKEL REGLIAISPL FGEMPYFMSE EFGLADCYLG PLLWRLPALG IHLDTGVAKD
IKAYMTRIFD RESFKASLTE AEREMRMGM
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