Gene Sama_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3015 
Symbol 
ID4605262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3590359 
End bp3591009 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content54% 
IMG OID639782426 
Productpara-aminobenzoate synthase glutamine amidotransferase, component II 
Protein accessionYP_928887 
Protein GI119776147 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0512] Anthranilate/para-aminobenzoate synthases component II 
TIGRFAM ID[TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00067902 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA GGCCGCTCTG TGCTAGGATT CGCGGCCTGT TCTGTTTGGA TTTCAACGCG 
CGGACGAATA AAAGCATGTT GCTCATGATA GACAACTACG ACTCTTTTAC CTTTAACCTG
GTGCAGTATT TTCAGCAGCT GGGGGAAGAG GTGGTTGTCC GTCGCCATGA CGATATTACG
CTGGAGGAAA TCGCTGCGCT GGCACCGGAC TATTTGGTGA TTTCACCCGG CCCCTGTACC
CCGGATGACG CGGGTGTTTC CCTGGACGCC ATCACTCATT TTGCCGGTAA GTTGCCCATT
CTGGGGGTGT GCCTGGGGCA TCAGGCGATG GCCCAGGTAT TTGGCGCTAA AGTGATCCGT
GCCGGAAGGG TGATGCATGG CAAAACCAGT GACATCAGCC ATAACAATCA GCGCCTGTTT
CGTGGCCTCA ATAACCCGCT GAGGGTCACC CGTTATCACT CGCTGTTGGT GGAGTCCGTA
CCCGAAGGCT TTGTGATGGA TGCCTGGTTT GACGATCCTG TCCATGGACG TGAAATCATG
GCCATCAGCC ATAAGTCCTT ACCGCTGTAT GGGGTGCAGT TCCATCCCGA ATCCATCCTT
ACCGAGCAAG GGCTCGAATT GCTTGGTAAT TTCCTTAAAA TCCCCGTCTG A
 
Protein sequence
MIRRPLCARI RGLFCLDFNA RTNKSMLLMI DNYDSFTFNL VQYFQQLGEE VVVRRHDDIT 
LEEIAALAPD YLVISPGPCT PDDAGVSLDA ITHFAGKLPI LGVCLGHQAM AQVFGAKVIR
AGRVMHGKTS DISHNNQRLF RGLNNPLRVT RYHSLLVESV PEGFVMDAWF DDPVHGREIM
AISHKSLPLY GVQFHPESIL TEQGLELLGN FLKIPV