| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3014 |
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| Symbol | |
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| ID | 4605261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3587752 |
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| End bp | 3590226 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782425 |
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| Product | dipeptidyl peptidase IV, putative |
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| Protein accession | YP_928886 |
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| Protein GI | 119776146 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.003026 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGG TTTACCGTCA CTTTGCTGTC AGTGCGTTGG CGCTGGCTAT CCTGTCCGGC
TGCGCTGCCA CCGAACACGC CGCAACTGCT CCATCAGCTG CCAATCAGAC ACCTGTGTCA
CAAGTGGAGC TGGCAACACC GCCTGTTGCC TCCGAACACC TGACCATGAA GCAAATTATG
GCCAATCCAG ACTGGATGGG CATATTCGCC CGCAATCCAT ACTGGAGCGA TGACGCCGGC
AGCGTACTGT TTGAGCGTCA GCCAAGTGCA TCGGCGCTTA AGTCCTACTA TGTTCAGGCG
CTGGATGGTG AAGCCCGTGA GTTGTCTTTG GGCGAGTTAC ATCAGGTCTC CCAGCGCAGT
GGTGTGCTGG ATAAGGCGAA AAAGCGCAAG GCCTACATCT ATCAGGGCAA CCTCTTCGTT
AAAGAGCTGT CCACCGGTGA AGTCGCACAG CTGACCCGTA CCAATACCCC AGTGGATGGT
GTGCGTTTCT TGGATAATGG TGACCTGGCC TTCTGGCAGG GGAACGCCGT ATTCCGCCTG
CATGCCAACG GCATGGTAGA GCAGCTTGCC GATATCCGAA TGAGCAATGC GCCCAAGGGC
GTTAAGGCCC CAGAGGCCTA TTTGGCTAAA GAGCAGGCAA AGCTCATCCA GTATGTTGCT
GCCCAGCATG ACAAAGCCAA AGCCCGCGAG GACTATAAAA AGGCGCTGGC TGAAGCCGAT
ACCACCATGA CGGCACAGCC CTGGTATTTG GGGGAGAGTG AGGTTGTCGT CGAACTGTCT
CTGTCAGCCG ATGGTCGTTA TGTGCTCGTC AGCCTTCAGG ATAAGAGTTA TCAGGGCCGC
AGTGAGCACG ACATCATGCC CAACTATCTG GGTAAGGATG GCTATGTGGA TGCGGTGCCT
GCCCGCGCGC GGGTAGCGGA AGATAATCCA CCGGGTCAGC GTCTGGTATT GATTGATCTT
AAAGACAAAC AAAAGCATGA CATCAGTATC GAAGGTCTGC AGGGCTTTGA TGAGGATGTG
CTCGCCGCGG TGAAGGCCGA CAACGCCAAA GCCCGGGGCG AAAGCTATCA AAGCGAGAAA
GCGCCCCGCA AAGTGCAGCT GATGCAGGAT TGGGGCTGGA GCCAGAGTGC CATCCAGTGG
AGTGATGATG GCAAGCTGCT GGTTATGCTC GAAGCGGTGG ATAATAAAGA CCGCTGGATT
GCATCTGTGA ATCTGGACTC CGGCAAGCTA ACCACAGAGC ATCGTCTCCA TGACGACGCC
TGGGTGAACT ACGACTACAA CCAGTTTGGT TGGCTCGAAG ATGGGCGTTT CTTTTTCCTG
TCAGAAGAGA CTGGCTATTC CCAGCTGTAC ATCAAGGCGC CGGGCAAGGC TGCAACGGCA
CTGACATCGG GTCAATTCGT GGTCAGTGAT GTCACCTTAA GCCCCGATGG CAAGCATCTG
TATTACAAGG CCAATAAAGA TCATCCCGGC GTTTACAATG TGTACCGCGT CGCTCTGGCC
GATGGCAAAG ACGAGCAATT GACCCATTGG GAAGGCACGC TGGATTACAG TTTGAGCCCG
GATGGTAAAC GCTTGCTGCT GACTGCCTCC AGCCGTATTC AGCCTGAAGA GCTTTATGTG
CAGGAGATTG GTGGCGAACT CAAGCGCCTG ACCCACTACA CCTCAGAGGT CTTTGCCAAG
TATACCTGGC AAGCGCCCAA CGTGGTGGCC GTGCCGTCCA ATCATGGTGC CGGTGTTGTT
TACGCCAGAG TGTATCTGCC CGAGGGGTAC GATGCTGCCA AGGCAGACAA GTATCCAGCG
GTGATTTTTA ACCATGGTGC CGGGTATCTG CAAAACGCGC ACTTTGGTTT CTCCGGCTAT
TTCCGCGAGT TTATGTTCCA CAACCTGCTG GCCCAGCAAG GTTATGTGGT GATGGACATG
GACTATCGTG GCTCCAAGGG GTATGGCCGT GACTGGCGCA CCGCCATCTA TCGTCAGATG
GGTCACCCTG AGGTGGAGGA TCTCAAAGAC GGCGTGGCCT GGATGGTGAA AAATGCCAAT
GTGGACAGCA AACGTGTGGG CACTTACGGC GGATCCTATG GTGGCTTCCT CACCTTTATG
GCGTTGTTCC GCGAGCCTGA GCTCTTCCAG GCTGGTGCAG CGCTGCGTCC GGTAACCGAC
TGGGCACATT ATAATGCGCC TTATACCTCC AACATCCTCA ATACACCGGA TGTGGACCCC
ATTGCCTTTG AACGCAGCTC ACCCATCTAT CATGCCGAGG GGCTGAACAA ACCGCTGCTT
ATCATGAGCG GTGTGCTGGA TGATAACGTG TTCTTCCAGG ACAGTGTGCG CCTGGTACAG
CGTTTGATTG AGCTTGAAAA GCCCATGTTC GAAACCGCTA TCTACCCGGT GGAGCCCCAT
GGTTTCCGAG AGCCGTCCAG TTGGCTCGAT GAATACCGCC GCATTTATAA GCTGTTTGAA
GCCGAGCTCA AGTAA
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| Protein sequence | MNPVYRHFAV SALALAILSG CAATEHAATA PSAANQTPVS QVELATPPVA SEHLTMKQIM
ANPDWMGIFA RNPYWSDDAG SVLFERQPSA SALKSYYVQA LDGEARELSL GELHQVSQRS
GVLDKAKKRK AYIYQGNLFV KELSTGEVAQ LTRTNTPVDG VRFLDNGDLA FWQGNAVFRL
HANGMVEQLA DIRMSNAPKG VKAPEAYLAK EQAKLIQYVA AQHDKAKARE DYKKALAEAD
TTMTAQPWYL GESEVVVELS LSADGRYVLV SLQDKSYQGR SEHDIMPNYL GKDGYVDAVP
ARARVAEDNP PGQRLVLIDL KDKQKHDISI EGLQGFDEDV LAAVKADNAK ARGESYQSEK
APRKVQLMQD WGWSQSAIQW SDDGKLLVML EAVDNKDRWI ASVNLDSGKL TTEHRLHDDA
WVNYDYNQFG WLEDGRFFFL SEETGYSQLY IKAPGKAATA LTSGQFVVSD VTLSPDGKHL
YYKANKDHPG VYNVYRVALA DGKDEQLTHW EGTLDYSLSP DGKRLLLTAS SRIQPEELYV
QEIGGELKRL THYTSEVFAK YTWQAPNVVA VPSNHGAGVV YARVYLPEGY DAAKADKYPA
VIFNHGAGYL QNAHFGFSGY FREFMFHNLL AQQGYVVMDM DYRGSKGYGR DWRTAIYRQM
GHPEVEDLKD GVAWMVKNAN VDSKRVGTYG GSYGGFLTFM ALFREPELFQ AGAALRPVTD
WAHYNAPYTS NILNTPDVDP IAFERSSPIY HAEGLNKPLL IMSGVLDDNV FFQDSVRLVQ
RLIELEKPMF ETAIYPVEPH GFREPSSWLD EYRRIYKLFE AELK
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