| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3011 |
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| Symbol | argD |
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| ID | 4605258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3583948 |
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| End bp | 3585162 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782422 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_928883 |
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| Protein GI | 119776143 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA AGATGAATCT GACACGTGCC CAATTTGATG AAGTAATGGT GCCTAACTAT
GCACCAGCTG CGGTTATCCC TGTCCGCGGT GAAGGCAGCC GTGTCTGGGA TCAGCAAGGT
ACCGAGTATG TGGACTTTGC CGGTGGCATC GCGGTGAACT GTCTTGGTCA TTGTCATCCC
GCCCTCGTTG GCGCACTGAA AGAGCAGGGC GAGAAACTCT GGCACCTGTC CAACACCATG
ACCAACGAGC CAGCGCTGGC ACTGGCTACC AAACTGGTTG AAGCAACCTT TGCCGACCGG
GTGTATTTTG CCAACTCAGG CGCCGAGGCC AACGAAGCGG CACTCAAGCT TGCACGCCGC
TATGCAATCG AAAAGTTCGG TGAACACAAG GTTGAAGTGA TTGCGTTCGA CAAGGCTTTC
CACGGTCGTA CTTTCTTCAC CGTGTCTGTG GGTGGCCAGG CCGCTTACTC AGACGGTTTC
GGTCCAAAGC CTGCCGCTAT TACCCATTTG CCATTCAATG ATATCGCTGC GCTGGAAGCG
GCTGTGTCCG ACAATACCTG CGCCATCATG CTCGAGCCAC TGCAGGGCGA GGGCGGTATC
ATCAACGGCG ACCCTGAATT CCTGCGTGCC GTTCGTCGAT TGGCCGACAA GCACAATGCG
CTGGTGATCT TCGACGAAGT CCAAACCGGC GTAGGCCGTA CCGGCGACCT CTATGCCTAT
ATGGGCACCG AAATCGTGCC GGATATCCTG ACCACCGCCA AGGCGTTGGG CGGTGGTTTC
CCCATCGCAG CCATGCTGAC CACTGCCGAC ATCGCCTCAC ACCTCAAGGT GGGCACCCAT
GGTTCCACCT ACGGTGGCAA CCCGCTGGCC TGTGCCATTG GTAACGCTGT GATGGACGTT
GTTAATACCC CTGAAGTGCT TGACGGCGTG AAGCATCGCG AGCAGCTGTT CCGCGATGGT
CTGGCCCAAA TTAATGAAAA GTATCATGTA TTCTCCGAAA TCCGTGGCAA GGGTCTGCTG
CTTGGCGCCG TACTCAACGA GCAGTTTGCC GGCCGTAGCC GCGATTTCCT TAATGCCTCT
GTTGCCGAGG GGCTGTTGAC TCTGATGGCC GGTGCCAACG TAGTCCGCTT TACTCCATCT
CTGGTAATTC CTGAGGCAGA TATTGTCGAA GGTCTGGCCC GTTTCGAACG TGCCGTTGCC
AAGGTAGCCG GCTGA
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| Protein sequence | MTDKMNLTRA QFDEVMVPNY APAAVIPVRG EGSRVWDQQG TEYVDFAGGI AVNCLGHCHP
ALVGALKEQG EKLWHLSNTM TNEPALALAT KLVEATFADR VYFANSGAEA NEAALKLARR
YAIEKFGEHK VEVIAFDKAF HGRTFFTVSV GGQAAYSDGF GPKPAAITHL PFNDIAALEA
AVSDNTCAIM LEPLQGEGGI INGDPEFLRA VRRLADKHNA LVIFDEVQTG VGRTGDLYAY
MGTEIVPDIL TTAKALGGGF PIAAMLTTAD IASHLKVGTH GSTYGGNPLA CAIGNAVMDV
VNTPEVLDGV KHREQLFRDG LAQINEKYHV FSEIRGKGLL LGAVLNEQFA GRSRDFLNAS
VAEGLLTLMA GANVVRFTPS LVIPEADIVE GLARFERAVA KVAG
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