Gene Sama_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3008 
Symbol 
ID4605255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3580353 
End bp3581150 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content53% 
IMG OID639782419 
Producthypothetical protein 
Protein accessionYP_928880 
Protein GI119776140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACTG ACGTAAATGC TTTGTTTGCC GCTCTCTGGC AGGACTATAT CGAAATGACC 
CCGTCTGCGG CCAAGGTGCA CAAACTGCTT GGCAAGGGCG AAGCCATCAT CAACGACCAT
ATCGCCCTGC GTACCTTTAA CCTTGCCAAG GTGAATCTGG AGGTGCTGGC TGCACACTTT
GAGGCGCTTG GCTATGTTGC CTGTGCCGAT TACAACTTTG ACAAGAAAAA GCTGCGTGCC
AAGCACTTCG AGCATCCCGA CAGCACACAG CCAAAGGTCT TCATTTCTGA GCTCCTGGTG
GAAGAGTTCA GCCCCCAGTT GCAGGTCATA GTCAAAGACA TGGTTGAGCA GGTGGATGCG
GCGGCGACCA AGGCTGAGAA TTTCCTCTAC TCAGGTCGTC ACTGGAAACT GGACTTTGTC
ACCTACGAGA AGCTTTTGGC CGAGAGTGAG TATGCGGCTT GGGTGGCGGC CTTTGGTTAT
CGCGCCAACC ACTTTACCGT GTCGATTAAT CACCTGCCCG GTTACACCAG TATTCTTGAG
GTGAATGACA CCCTTAAGCA GGGAGACTTT GTACTGAACG CCGTCGGTGG TGAAGTGAAA
GGCTCACCTG CCGAGCTGCT TGAGCAGTCA TCCACCATGG CCGACCGTAT TGCGGTGACG
TTTGATGATA AAACCGTTGA GCTGCCGAGC TGCTTTTACG AGTTTGCCCT GCGGTATCCC
AAGGCCGATG GCGAGCTTTA CACCGGCTTT GTGGCGGCCT CTGCCGACAA GATTTTCGAG
AGTACCAACG TAAACTGA
 
Protein sequence
MHTDVNALFA ALWQDYIEMT PSAAKVHKLL GKGEAIINDH IALRTFNLAK VNLEVLAAHF 
EALGYVACAD YNFDKKKLRA KHFEHPDSTQ PKVFISELLV EEFSPQLQVI VKDMVEQVDA
AATKAENFLY SGRHWKLDFV TYEKLLAESE YAAWVAAFGY RANHFTVSIN HLPGYTSILE
VNDTLKQGDF VLNAVGGEVK GSPAELLEQS STMADRIAVT FDDKTVELPS CFYEFALRYP
KADGELYTGF VAASADKIFE STNVN