Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3008 |
Symbol | |
ID | 4605255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3580353 |
End bp | 3581150 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639782419 |
Product | hypothetical protein |
Protein accession | YP_928880 |
Protein GI | 119776140 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACTG ACGTAAATGC TTTGTTTGCC GCTCTCTGGC AGGACTATAT CGAAATGACC CCGTCTGCGG CCAAGGTGCA CAAACTGCTT GGCAAGGGCG AAGCCATCAT CAACGACCAT ATCGCCCTGC GTACCTTTAA CCTTGCCAAG GTGAATCTGG AGGTGCTGGC TGCACACTTT GAGGCGCTTG GCTATGTTGC CTGTGCCGAT TACAACTTTG ACAAGAAAAA GCTGCGTGCC AAGCACTTCG AGCATCCCGA CAGCACACAG CCAAAGGTCT TCATTTCTGA GCTCCTGGTG GAAGAGTTCA GCCCCCAGTT GCAGGTCATA GTCAAAGACA TGGTTGAGCA GGTGGATGCG GCGGCGACCA AGGCTGAGAA TTTCCTCTAC TCAGGTCGTC ACTGGAAACT GGACTTTGTC ACCTACGAGA AGCTTTTGGC CGAGAGTGAG TATGCGGCTT GGGTGGCGGC CTTTGGTTAT CGCGCCAACC ACTTTACCGT GTCGATTAAT CACCTGCCCG GTTACACCAG TATTCTTGAG GTGAATGACA CCCTTAAGCA GGGAGACTTT GTACTGAACG CCGTCGGTGG TGAAGTGAAA GGCTCACCTG CCGAGCTGCT TGAGCAGTCA TCCACCATGG CCGACCGTAT TGCGGTGACG TTTGATGATA AAACCGTTGA GCTGCCGAGC TGCTTTTACG AGTTTGCCCT GCGGTATCCC AAGGCCGATG GCGAGCTTTA CACCGGCTTT GTGGCGGCCT CTGCCGACAA GATTTTCGAG AGTACCAACG TAAACTGA
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Protein sequence | MHTDVNALFA ALWQDYIEMT PSAAKVHKLL GKGEAIINDH IALRTFNLAK VNLEVLAAHF EALGYVACAD YNFDKKKLRA KHFEHPDSTQ PKVFISELLV EEFSPQLQVI VKDMVEQVDA AATKAENFLY SGRHWKLDFV TYEKLLAESE YAAWVAAFGY RANHFTVSIN HLPGYTSILE VNDTLKQGDF VLNAVGGEVK GSPAELLEQS STMADRIAVT FDDKTVELPS CFYEFALRYP KADGELYTGF VAASADKIFE STNVN
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