| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3006 |
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| Symbol | |
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| ID | 4605253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3578268 |
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| End bp | 3578942 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782417 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_928878 |
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| Protein GI | 119776138 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0347664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTGC TACTCGTTGA AGACAATGCC ATGCTGGTCA AGGAGCTGCA AAAACAGCTC
AAACAGGCCG GCTTTGTCAC CGATGTAACC GATAAGGTCG TTGACGCCGA TTATCTCATC
AAAGAAACCC AATACGACTG CGTGATTCTG GACATCGGCC TTCCCGATGG CAACGGTCTG
ACACTACTGG AAAAATGGCG TACCGAGGGT ATTCATACCC CCGTGATCAT GCTCACCGCC
CGCAGCCAAT GGCATGAGAA GGTGGAAGGC TTTAACGCCG GTGCCGATGA CTACCTTGGT
AAACCGTTCC ACGCCCAGGA GTTGCTCGCC CGAATTCATG CGCTGATAAA CCGCGCCCAT
GGCCGCCCTG CCAGCCCGGG AAAGCAGCTC AGCTACTCAG GCGTCGTACT GGATGAATCG
CAGCAAACGG TGCAGGTGGG TGAGCAGGTC CATGAGCTGA CTGCCATGGA ATTCAGACTG
CTGAAGATTT TCCTGCTATC GCCGAAAAAG CTGCTGTCCA AGGCGCAGCT TACCGACAAG
CTCTATCAGT TTGACGATGA GAAAGAGAGC AATGTGGTGG AGGTTTACGT GACCCACCTG
CGTAAAAAAC TGGGCAAGAC CGCCATCGAA ACCCGCCGCG GTCAGGGATA TATCTTCCAC
GGCCTGGACG CATGA
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| Protein sequence | MKLLLVEDNA MLVKELQKQL KQAGFVTDVT DKVVDADYLI KETQYDCVIL DIGLPDGNGL
TLLEKWRTEG IHTPVIMLTA RSQWHEKVEG FNAGADDYLG KPFHAQELLA RIHALINRAH
GRPASPGKQL SYSGVVLDES QQTVQVGEQV HELTAMEFRL LKIFLLSPKK LLSKAQLTDK
LYQFDDEKES NVVEVYVTHL RKKLGKTAIE TRRGQGYIFH GLDA
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