Gene Sama_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3005 
Symbol 
ID4605252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3577943 
End bp3578287 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content54% 
IMG OID639782416 
Producthypothetical protein 
Protein accessionYP_928877 
Protein GI119776137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000355724 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCT GGCTGCCATT AGGCATCATC CTTACATCCA TGCTTCACCA GGGAGAGGTG 
GCTGCTTCGG TTGTCGAGCT TGAGCATTAT CAGGCCACGC AATTGGTCAG TTCGGGCCAG
ATCCTTTCTC TCGACGCTAC CCTGCAGCGG GTCGCCGCAC ATTGCCAGGG TAACCTCCTT
GATGCCCATC TGTTTCAAGA GGGTGACAAG TGGCGCTACG ATTTGCAGTT TGGCCTCCAA
CGTGGTCAGA TAATCCATCT GAGCGTGGAT GCCGCCAGCG GTGAGCTCAA TCCTGATTCC
ACTTTGCCGG ACGAATGCAA AAACCATGAA ACTGCTACTC GTTGA
 
Protein sequence
MSRWLPLGII LTSMLHQGEV AASVVELEHY QATQLVSSGQ ILSLDATLQR VAAHCQGNLL 
DAHLFQEGDK WRYDLQFGLQ RGQIIHLSVD AASGELNPDS TLPDECKNHE TATR