Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2985 |
Symbol | napH |
ID | 4605232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3556626 |
End bp | 3557537 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639782396 |
Product | quinol dehydrogenase membrane component |
Protein accession | YP_928857 |
Protein GI | 119776117 |
COG category | [C] Energy production and conversion |
COG ID | [COG0348] Polyferredoxin |
TIGRFAM ID | [TIGR02163] ferredoxin-type protein, NapH/MauN family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTG CCAAGGTAAA CCAAGCACGC TTTGCCGAGG ATGCCATCCG CGAACTCGGT TGGTGGAAGG CGCATCGCTT TTTGCTGCTG CGCCGCGCCA CACAACTGAC CGTGCTGGCG CTGTTTGCCA TTGGCCCCCT GTTGGGGCTG TGGCTGCTCA AGGGCAACCT GTCGTCCAGC TTGCTGCTCG ATACCATCCC CATGGCCGAC CCGCTGGTCA CACTGCAGCT GCTTACCGCT GGCCATGTGC CAGAGGCCAG CCTGCTGATT GGCGCTGCCA TTATCGGCCT GTTTTACGCG CTGATGGGGG GACGGGTGTT CTGCAGCTGG GTGTGTCCGG TGAACATGGT GACGGATTTG GCGGCCTACC TTCGCAGACG CTTTGCCCTG CCAAGAACCC CGGAGCTGCC GCGCCAGCTG CGCTACTTTA TGTTGGCGCT GGTGCTGCTG TTGCCTGTGG TCACAGGCAT CGCCGCCTGG GAGTGGCTCA ATCCCGTGCC CGTGCTTTAC CGCGCCGTGC TGTTTGGCGC TGGTGCCGGG CTTGGGCTGC TTGTCGCCAT CTTCCTTGCG GATCTCCTGA TAGTCGAGCG GCTGTGGTGC TCGCACCTGT GCCCCAGTGG CGCCCTGTTT GCCCTCCTTG GCAAGTTAAG CCCGGTGAAG ATGACCGCGG TGAACGCCAA AGACTGCAAC AACTGCATGG ATTGCTTCGT GGTCTGCCCC GAGCGTCAGG TGCTCAAACC TGCCCTCAAG GGCGCAAATC CGATGATTAC AGACTCGGAC TGCACCCAGT GCGGCCGCTG TATCGATGTG TGTGCCAAAG GCGTATTCCA GTACAAGAAC CGATTTACAT TCCAGGATAA TCCTTTACAG AAAAGCCCCC GAATTGCCAA GAAGGCGGAG AACGAACAAT GA
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Protein sequence | MSTAKVNQAR FAEDAIRELG WWKAHRFLLL RRATQLTVLA LFAIGPLLGL WLLKGNLSSS LLLDTIPMAD PLVTLQLLTA GHVPEASLLI GAAIIGLFYA LMGGRVFCSW VCPVNMVTDL AAYLRRRFAL PRTPELPRQL RYFMLALVLL LPVVTGIAAW EWLNPVPVLY RAVLFGAGAG LGLLVAIFLA DLLIVERLWC SHLCPSGALF ALLGKLSPVK MTAVNAKDCN NCMDCFVVCP ERQVLKPALK GANPMITDSD CTQCGRCIDV CAKGVFQYKN RFTFQDNPLQ KSPRIAKKAE NEQ
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